C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: keratin 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000463128 KRT17-002 ENSG00000128422 9606 - 17:41621026-41624842 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLungOvaryPlacentaENST00000463128
Transcript ID Breast Lung Ovary Placenta
ENST00000463128 3.034±0.00 0.522±0.00 260.966±236.17 47.011±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_000M CGP 17:41609778-41624842
CIL_0000TT CIL_0000TT_0002 CGP 17:41619437-41692668

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080893 Krt17-001 protein_coding Mus_musculus 0 785
ENSMUST00000007272 Krt14-001 protein_coding Mus_musculus 0 750
ENSMUST00000137265 Krt14-002 processed_transcript Mus_musculus 0 656
ENSMUST00000007317 Krt19-001 protein_coding Mus_musculus 0 412
ENSMUST00000107411 Krt15-001 protein_coding Mus_musculus 0 359
ENSMUST00000126460 Krt19-002 processed_transcript Mus_musculus 0 337
ENSMUST00000007275 Krt13-001 protein_coding Mus_musculus 0 278
ENSMUST00000148502 Krt15-002 retained_intron Mus_musculus 0 257
ENSMUST00000103131 Krt10-001 protein_coding Mus_musculus 0 252
ENSMUST00000128934 Krt13-002 processed_transcript Mus_musculus 0 248

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