C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000464634 KRT13-006 ENSG00000171401 9606 - 17:41502250-41505612 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartLungOvaryPlacentaENST00000464634
Transcript ID Adipose Breast Heart Lung Ovary Placenta
ENST00000464634 1.685±0.00 0.065±0.02 0.090±0.00 2.096±0.00 232.621±232.51 0.268±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_000C CGP 17:41486136-41505705
CIL_00056U CIL_00056U_000I CGP 17:41500981-41522529

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007275 Krt13-001 protein_coding Mus_musculus 0 1171
ENSMUST00000107411 Krt15-001 protein_coding Mus_musculus 0 915
ENSMUST00000017270 Krt42-001 protein_coding Mus_musculus 0 606
ENSMUST00000128934 Krt13-002 processed_transcript Mus_musculus 0 558
ENSMUST00000007317 Krt19-001 protein_coding Mus_musculus 0 542
ENSMUST00000126460 Krt19-002 processed_transcript Mus_musculus 0 433
ENSMUST00000103131 Krt10-001 protein_coding Mus_musculus 0 265
ENSMUST00000017741 Krt12-001 protein_coding Mus_musculus 0 213
ENSMUST00000125888 Krt19-003 processed_transcript Mus_musculus 0 198
ENSMUST00000134282 Krt13-003 retained_intron Mus_musculus 8e-30 135

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