| Transcript ID | Adrenal | Bladder | Lung | Ovary |
|---|---|---|---|---|
| ENSMUST00000106461 | 0.251±0.00 | 1.393±0.00 | 0.495±0.00 | 0.800±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | integrin beta 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000106461  |
Itgb4-201 |
ENSMUSG00000020758 |
10090 | + |
11:115974725-116008411  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002K8 | CIL_0002K8_0003 | CGP | 11:115933282-116008412 |
| CIL_00078P | CIL_00078P_0002 | CGP | 11:115974709-116012719 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004872 | IEA | receptor activity |
| GO:0005604 | IDA | basement membrane |
| GO:0007155 | IMP | cell adhesion |
| GO:0007160 | IEA | cell-matrix adhesion |
| GO:0007229 | IEA | integrin-mediated signaling pathway |
| GO:0007275 | IEA | multicellular organismal development |
| GO:0008305 | IDA | integrin complex |
| GO:0009611 | ISS | response to wounding |
| GO:0009925 | IDA | basal plasma membrane |
| GO:0030056 | IDA | hemidesmosome |
| GO:0031252 | ISS | cell leading edge |
| GO:0043235 | ISO | receptor complex |
| GO:0046847 | IMP | filopodium assembly |
| GO:0048870 | ISS | cell motility |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000029308
|
itgb4-001 | protein_coding | Danio_rerio | 0 | 281 |
|
ENST00000200181
|
ITGB4-001 | protein_coding | Homo_sapiens | 0 | 5851 |
|
ENST00000449880
|
ITGB4-003 | protein_coding | Homo_sapiens | 0 | 4488 |
|
ENST00000450894
|
ITGB4-002 | protein_coding | Homo_sapiens | 0 | 4494 |
|
ENST00000578318
|
ITGB4-014 | protein_coding | Homo_sapiens | 9e-32 | 141 |
|
ENST00000579211
|
ITGB4-013 | retained_intron | Homo_sapiens | 0 | 307 |
|
ENST00000579662
|
ITGB4-007 | protein_coding | Homo_sapiens | 0 | 4597 |
|
ENST00000580542
|
ITGB4-004 | retained_intron | Homo_sapiens | 0 | 2920 |
|
ENST00000583327
|
ITGB4-011 | protein_coding | Homo_sapiens | 0 | 324 |
|
ENST00000584025
|
ITGB4-010 | retained_intron | Homo_sapiens | 0 | 355 |
|
ENST00000584374
|
ITGB4-009 | processed_transcript | Homo_sapiens | 0 | 948 |
|
ENST00000584558
|
ITGB4-005 | processed_transcript | Homo_sapiens | 0 | 2824 |
|
ENST00000584939
|
ITGB4-012 | protein_coding | Homo_sapiens | 0 | 499 |
