C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00078P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132470-ENSG00000108479 CGP 9606 17:75721328-75765711
GeneTranscriptPositionBiotype
ENSG00000108479 (GALK1)
galactokinase 1 		ENST00000225614 (GALK1-002) 75751594-75765236 protein_coding
ENST00000586244 (GALK1-003) 75762758-75765192 nonsense_mediated_decay
ENST00000586733 (GALK1-008) 75757972-75758518 retained_intron
ENST00000587707 (GALK1-006) 75758512-75764005 nonsense_mediated_decay
ENST00000588479 (GALK1-001) 75757944-75765711 protein_coding
ENST00000589030 (GALK1-005) 75763383-75765133 retained_intron
ENST00000589643 (GALK1-009) 75751679-75758519 retained_intron
ENST00000592494 (GALK1-004) 75758591-75765157 retained_intron
ENST00000592997 (GALK1-007) 75757894-75763090 protein_coding
ENSG00000132470 (ITGB4)
integrin, beta 4 		ENST00000200181 (ITGB4-001) 75721436-75757818 protein_coding
ENST00000449880 (ITGB4-003) 75724696-75757818 protein_coding
ENST00000450894 (ITGB4-002) 75721497-75757815 protein_coding
ENST00000578318 (ITGB4-014) 75757039-75757818 protein_coding
ENST00000579211 (ITGB4-013) 75754483-75755778 retained_intron
ENST00000579662 (ITGB4-007) 75721328-75757604 protein_coding
ENST00000580542 (ITGB4-004) 75721509-75741105 retained_intron
ENST00000582629 (ITGB4-008) 75727801-75757818 protein_coding
ENST00000583327 (ITGB4-011) 75751813-75755808 protein_coding
ENST00000584025 (ITGB4-010) 75742424-75749045 retained_intron
ENST00000584374 (ITGB4-009) 75731820-75739905 processed_transcript
ENST00000584558 (ITGB4-005) 75724704-75742657 processed_transcript
ENST00000584939 (ITGB4-012) 75754618-75757002 protein_coding
CIL_00078P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020758-ENSMUSG00000020766 CGP 10090 11:115974709-116012719
GeneTranscriptPositionBiotype
ENSMUSG00000020758 (Itgb4)
integrin beta 4 		ENSMUST00000021107 (Itgb4-001) 115974709-116008412 protein_coding
ENSMUST00000068981 (Itgb4-002) 115977786-116008412 protein_coding
ENSMUST00000106458 (Itgb4-004) 115977786-116008412 protein_coding
ENSMUST00000106460 (Itgb4-003) 115974979-116008412 protein_coding
ENSMUST00000106461 (Itgb4-201) 115974725-116008411 protein_coding
ENSMUST00000127523 (Itgb4-007) 115990952-115991973 processed_transcript
ENSMUST00000130286 (Itgb4-008) 115992932-115994330 processed_transcript
ENSMUST00000150129 (Itgb4-006) 115989938-115991050 processed_transcript
ENSMUST00000151691 (Itgb4-005) 115974843-115994760 processed_transcript
ENSMUST00000169928 (Itgb4-202) 115974725-116008411 protein_coding
ENSMUSG00000020766 (Galk1)
galactokinase 1 		ENSMUST00000021114 (Galk1-001) 116008457-116012719 protein_coding
ENSMUSG00000097800 (B230344G16Rik)
RIKEN cDNA B230344G16 gene 		ENSMUST00000180782 (B230344G16Rik-201) 115988052-115993715 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00078P_0001ENSG00000108479ENST00000225614ENST00000586244ENST00000586733ENST00000587707ENST00000588479ENST00000589030ENST00000589643ENST00000592494ENST00000592997ENSG00000132470ENST00000200181ENST00000449880ENST00000450894ENST00000578318ENST00000579211ENST00000579662ENST00000580542ENST00000582629ENST00000583327ENST00000584025ENST00000584374ENST00000584558ENST00000584939CIL_00078P_0002ENSMUSG00000020758ENSMUST00000021107ENSMUST00000068981ENSMUST00000106458ENSMUST00000106460ENSMUST00000106461ENSMUST00000127523ENSMUST00000130286ENSMUST00000150129ENSMUST00000151691ENSMUST00000169928ENSMUSG00000020766ENSMUST00000021114ENSMUSG00000097800ENSMUST00000180782
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00078P_0001ENSG00000108479ENST00000225614ENST00000587707ENST00000588479ENST00000589030ENST00000592494ENST00000592997ENSG00000132470ENST00000200181ENST00000449880ENST00000450894ENST00000578318ENST00000579662ENST00000580542ENST00000582629ENST00000584558CIL_00078P_0002ENSMUSG00000020758ENSMUST00000021107ENSMUST00000068981ENSMUST00000106458ENSMUST00000106460ENSMUST00000106461ENSMUST00000127523ENSMUST00000169928ENSMUSG00000020766ENSMUST00000021114ENSMUSG00000097800ENSMUST00000180782
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108479 ENST00000225614 8.611±0.00 8.856±0.00 N/A 1.909±1.50 2.884±1.81 1.622±0.89 2.378±2.23 9.402±0.57 27.849±0.00 5.562±0.00 2.247±0.00 7.978±5.76 13.632±5.27 5.649±2.75
ENST00000586244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587707 4.317±0.00 3.507±0.00 1.328±0.00 1.357±0.23 3.709±0.00 1.554±0.58 0.924±0.52 5.689±1.64 15.622±0.00 4.899±0.00 2.273±0.00 2.444±1.07 N/A N/A
ENST00000588479 N/A N/A N/A 0.275±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589030 N/A N/A N/A N/A 0.633±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592494 N/A N/A 3.444±0.00 N/A 2.059±0.00 0.195±0.00 N/A N/A N/A N/A 1.062±0.00 N/A N/A N/A
ENST00000592997 3.323±0.00 7.583±0.00 N/A N/A 2.739±0.00 3.471±0.00 1.725±0.00 6.224±0.00 17.051±0.00 3.613±0.00 0.559±0.00 10.527±2.74 7.471±1.65 3.844±2.70
ENSG00000132470 ENST00000200181 2.160±0.00 3.195±0.00 N/A 2.573±2.13 1.732±0.91 N/A N/A N/A 0.600±0.00 1.314±0.00 0.468±0.00 N/A N/A 1.323±0.00
ENST00000449880 8.662±0.00 N/A 0.318±0.00 7.068±0.00 N/A 13.185±0.00 1.918±0.00 1.224±0.00 0.111±0.00 3.613±1.66 0.718±0.00 5.887±0.15 N/A 0.639±0.00
ENST00000450894 N/A N/A N/A 5.935±0.00 N/A 4.080±0.00 N/A 0.881±0.00 N/A N/A N/A 2.922±1.46 49.208±11.58 N/A
ENST00000578318 N/A N/A N/A N/A N/A N/A N/A 0.363±0.00 N/A N/A N/A N/A N/A N/A
ENST00000579211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579662 2.042±0.00 8.263±0.00 N/A 5.356±0.00 8.127±6.55 16.532±0.00 0.541±0.00 2.856±0.00 0.110±0.00 N/A N/A 10.050±7.85 18.241±9.53 2.193±1.96
ENST00000580542 N/A N/A 1.274±0.00 0.600±0.00 4.363±0.00 7.669±0.00 0.505±0.00 0.210±0.00 3.331±0.00 4.595±0.00 N/A 7.223±0.00 N/A N/A
ENST00000582629 N/A N/A N/A N/A N/A N/A N/A 0.381±0.00 N/A N/A N/A N/A N/A N/A
ENST00000583327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584558 N/A N/A N/A 0.734±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020758 ENSMUST00000021107 N/A 0.462±0.04 2.669±1.23 N/A 1.127±0.00 N/A 0.293±0.00 0.489±0.10 0.025±0.00 N/A 0.133±0.00 1.072±0.00 1.132±0.55 N/A
ENSMUST00000068981 1.464±0.98 N/A 9.654±3.60 0.497±0.19 3.239±1.18 29.518±11.41 0.318±0.17 1.277±0.12 0.053±0.03 2.844±0.98 0.502±0.20 3.576±1.14 4.913±2.97 0.073±0.04
ENSMUST00000106458 N/A N/A N/A N/A N/A N/A N/A N/A 0.034±0.02 N/A 0.323±0.00 N/A N/A N/A
ENSMUST00000106460 0.988±0.44 1.103±0.00 N/A N/A 2.059±0.53 7.252±1.46 0.415±0.23 0.502±0.00 0.073±0.04 1.221±0.00 0.382±0.23 1.879±0.46 N/A N/A
ENSMUST00000106461 N/A 0.251±0.00 1.393±0.00 N/A N/A N/A N/A N/A N/A 0.495±0.00 N/A 0.800±0.00 N/A N/A
ENSMUST00000127523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.588±0.00
ENSMUST00000130286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169928 0.694±0.00 0.505±0.32 N/A 0.089±0.00 N/A N/A N/A N/A N/A 0.721±0.00 N/A N/A N/A N/A
ENSMUSG00000020766 ENSMUST00000021114 15.374±3.85 28.743±5.69 24.383±3.41 11.716±4.46 14.330±6.19 18.482±1.13 5.763±1.38 34.659±2.60 48.534±18.94 18.936±2.28 1.231±0.34 38.765±14.08 107.751±67.78 11.606±3.84
ENSMUSG00000097800 ENSMUST00000180782 N/A N/A N/A N/A N/A N/A N/A N/A 0.068±0.01 N/A N/A N/A N/A 0.179±0.08

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