C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PC4 and SFRS1 interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107214 Psip1-003 ENSMUSG00000028484 10090 - 4:83461871-83486453 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaENSMUST00000107214
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENSMUST00000107214 12.949±0.00 35.046±20.16 41.348±1.02 32.073±0.00 20.516±9.63 3.279±0.68 8.370±4.24 7.888±2.09 1.605±0.44 99.370±32.70 12.359±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000147 CIL_000147_0002 CGP 4:83220300-83467676
CIL_0005UX CIL_0005UX_0003 CGP 4:83417724-83486459
CIL_00051U CIL_00051U_0003 CGP 4:83455680-83864670

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380715 PSIP1-006 protein_coding Homo_sapiens 0 2185
ENST00000380716 PSIP1-007 protein_coding Homo_sapiens 0 1458
ENST00000380733 PSIP1-003 protein_coding Homo_sapiens 0 1443
ENST00000380738 PSIP1-004 protein_coding Homo_sapiens 0 1458
ENST00000397519 PSIP1-201 protein_coding Homo_sapiens 0 1271
ENST00000422292 RP11-54D18.4-001 processed_pseudogene Homo_sapiens 0 1086
ENST00000463712 PSIP1-010 processed_transcript Homo_sapiens 0 632
ENST00000481862 PSIP1-005 protein_coding Homo_sapiens 0 259
ENST00000484265 PSIP1-008 processed_transcript Homo_sapiens 0 442
ENST00000487363 PSIP1-009 processed_transcript Homo_sapiens 0 704
ENST00000488797 PSIP1-001 processed_transcript Homo_sapiens 0 460

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