Transcript ID | Adipose | Breast | Colon | Heart | Kidney | Liver | Lung | Ovary | Placenta | Testis |
---|---|---|---|---|---|---|---|---|---|---|
ENSMUST00000107920 | 25.780±0.00 | 14.190±1.04 | 23.324±5.67 | 9.133±1.69 | 17.483±0.94 | 28.416±26.77 | 15.735±0.66 | 35.203±4.89 | 54.556±21.53 | 27.293±1.20 |
Transcript Info |
||||||
Description: | serine/arginine-rich splicing factor 1 | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000107920 | Srsf1-006 | ENSMUSG00000018379 | 10090 | + | 11:88047803-88050410 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0009DL | CIL_0009DL_0002 | VISTA | 11:87880548-88481652 |
CIL_0009DM | CIL_0009DM_0002 | VISTA | 11:87974079-88576075 |
CIL_00039M | CIL_00039M_0002 | CGP | 11:87979525-88053755 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0000166 | IEA | nucleotide binding |
GO:0001701 | IMP | in utero embryonic development |
GO:0003729 | ISO | mRNA binding |
GO:0005634 | IDA | nucleus |
GO:0006355 | IEA | regulation of transcription, DNA-templated |
GO:0006417 | IEA | regulation of translation |
GO:0008380 | IGI | RNA splicing |
GO:0016607 | IDA | nuclear speck |
GO:0043488 | IEA | regulation of mRNA stability |
GO:0048024 | IEA | regulation of mRNA splicing, via spliceosome |
GO:0050733 | IPI | RS domain binding |
GO:0060048 | IGI | cardiac muscle contraction |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENST00000258962 | SRSF1-001 | protein_coding | Homo_sapiens | 0 | 1147 |
ENST00000578430 | SRSF1-007 | retained_intron | Homo_sapiens | 0 | 523 |
ENST00000578794 | RP11-159D12.5-001 | protein_coding | Homo_sapiens | 0 | 222 |
ENST00000581497 | SRSF1-009 | processed_transcript | Homo_sapiens | 0 | 222 |
ENST00000581979 | SRSF1-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 804 |
ENST00000582730 | SRSF1-003 | protein_coding | Homo_sapiens | 0 | 804 |
ENST00000583741 | SRSF1-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 848 |
ENST00000584668 | SRSF1-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 848 |
ENST00000584773 | SRSF1-002 | protein_coding | Homo_sapiens | 0 | 1779 |
ENST00000585096 | SRSF1-006 | protein_coding | Homo_sapiens | 0 | 342 |