C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | RNA polymerase II associated protein 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000110793  |
Rpap1-006 |
ENSMUSG00000034032 |
10090 | - |
2:119763304-119787504  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005IS | CIL_0005IS_0003 | CGP | 2:119751320-119787537 |
| CIL_0005F5 | CIL_0005F5_0002 | CGP | 2:119763304-119818104 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0003899 | IEA | DNA-directed RNA polymerase activity |
| GO:0005634 | IEA | nucleus |
| GO:0032774 | IEA | RNA biosynthetic process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000304330
|
RPAP1-001 | protein_coding | Homo_sapiens | 0 | 3101 |
|
ENST00000561603
|
RPAP1-004 | protein_coding | Homo_sapiens | 0 | 2045 |
|
ENST00000562303
|
RPAP1-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 2745 |
|
ENST00000563293
|
RPAP1-011 | retained_intron | Homo_sapiens | 0 | 254 |
|
ENST00000565167
|
RPAP1-006 | retained_intron | Homo_sapiens | 0 | 950 |
|
ENST00000566863
|
RPAP1-008 | protein_coding | Homo_sapiens | 0 | 396 |
|
ENST00000567866
|
RPAP1-010 | protein_coding | Homo_sapiens | 0 | 483 |
|
ENST00000568413
|
RPAP1-015 | processed_transcript | Homo_sapiens | 0 | 436 |
