C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005F5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000103932-ENSG00000092445 CGP 9606 15:41517176-41583586
GeneTranscriptPositionBiotype
ENSG00000092445 (TYRO3)
TYRO3 protein tyrosine kinase 		ENST00000263798 (TYRO3-001) 41559034-41583586 protein_coding
ENST00000559066 (TYRO3-002) 41557675-41578805 protein_coding
ENST00000559815 (TYRO3-006) 41567379-41570339 nonsense_mediated_decay
ENST00000559851 (TYRO3-008) 41571103-41573467 nonsense_mediated_decay
ENST00000560162 (TYRO3-007) 41570938-41573377 retained_intron
ENST00000560227 (TYRO3-005) 41564784-41568265 retained_intron
ENST00000560992 (TYRO3-003) 41559227-41562355 retained_intron
ENST00000568343 (TYRO3-010) 41570677-41577973 protein_coding
ENST00000568490 (TYRO3-011) 41577335-41579338 retained_intron
ENSG00000103932 (RPAP1)
RNA polymerase II associated protein 1 		ENST00000304330 (RPAP1-001) 41517176-41544259 protein_coding
ENST00000561603 (RPAP1-004) 41517176-41544257 protein_coding
ENST00000561631 (RPAP1-013) 41523948-41525207 retained_intron
ENST00000562303 (RPAP1-005) 41517179-41544245 nonsense_mediated_decay
ENST00000563293 (RPAP1-011) 41534805-41536375 retained_intron
ENST00000564934 (RPAP1-014) 41522506-41523844 retained_intron
ENST00000565035 (RPAP1-012) 41523779-41526970 protein_coding
ENST00000565167 (RPAP1-006) 41517176-41521791 retained_intron
ENST00000566863 (RPAP1-008) 41536163-41544269 protein_coding
ENST00000567866 (RPAP1-010) 41535512-41544250 protein_coding
ENST00000568413 (RPAP1-015) 41527988-41533394 processed_transcript
ENST00000569829 (RPAP1-009) 41536653-41544266 retained_intron
ENSG00000259838 (TCEB1P2)
transcription elongation factor B (SIII), polypeptide 1 pseudogene 2 		ENST00000566760 (TCEB1P2-001) 41557027-41557435 unprocessed_pseudogene
CIL_0005F5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034032-ENSMUSG00000027298 CGP 10090 2:119763304-119818104
GeneTranscriptPositionBiotype
ENSMUSG00000027298 (Tyro3)
TYRO3 protein tyrosine kinase 3 		ENSMUST00000028763 (Tyro3-002) 119799514-119818104 protein_coding
ENSMUST00000110783 (Tyro3-001) 119797733-119818104 protein_coding
ENSMUST00000130456 (Tyro3-007) 119803087-119807990 retained_intron
ENSMUST00000135726 (Tyro3-006) 119801116-119803293 processed_transcript
ENSMUST00000137135 (Tyro3-008) 119810846-119812391 retained_intron
ENSMUST00000147636 (Tyro3-004) 119799239-119805650 processed_transcript
ENSMUST00000147761 (Tyro3-003) 119809208-119818091 retained_intron
ENSMUST00000148343 (Tyro3-005) 119799327-119803335 processed_transcript
ENSMUSG00000034032 (Rpap1)
RNA polymerase II associated protein 1 		ENSMUST00000048493 (Rpap1-002) 119763960-119787537 protein_coding
ENSMUST00000099529 (Rpap1-001) 119763959-119787528 protein_coding
ENSMUST00000110793 (Rpap1-006) 119763304-119787504 protein_coding
ENSMUST00000133146 (Rpap1-009) 119777857-119780202 retained_intron
ENSMUST00000136419 (Rpap1-005) 119763963-119787500 nonsense_mediated_decay
ENSMUST00000139311 (Rpap1-003) 119766859-119787519 retained_intron
ENSMUST00000141800 (Rpap1-008) 119778188-119787529 processed_transcript
ENSMUST00000156506 (Rpap1-007) 119777651-119787514 retained_intron
ENSMUST00000184294 (Rpap1-004) 119763966-119787520 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005F5_0001ENSG00000092445ENST00000263798ENST00000559066ENST00000559815ENST00000559851ENST00000560162ENST00000560227ENST00000560992ENST00000568343ENST00000568490ENSG00000103932ENST00000304330ENST00000561603ENST00000561631ENST00000562303ENST00000563293ENST00000564934ENST00000565035ENST00000565167ENST00000566863ENST00000567866ENST00000568413ENST00000569829ENSG00000259838ENST00000566760CIL_0005F5_0002ENSMUSG00000027298ENSMUST00000028763ENSMUST00000110783ENSMUST00000130456ENSMUST00000135726ENSMUST00000137135ENSMUST00000147636ENSMUST00000147761ENSMUST00000148343ENSMUSG00000034032ENSMUST00000048493ENSMUST00000099529ENSMUST00000110793ENSMUST00000133146ENSMUST00000136419ENSMUST00000139311ENSMUST00000141800ENSMUST00000156506ENSMUST00000184294
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005F5_0001ENSG00000092445ENST00000263798ENST00000559066ENST00000559851ENST00000560992ENST00000568343ENST00000568490ENSG00000103932ENST00000304330ENST00000561603ENST00000561631ENST00000562303ENST00000565167ENST00000569829ENSG00000259838ENST00000566760CIL_0005F5_0002ENSMUSG00000027298ENSMUST00000028763ENSMUST00000110783ENSMUST00000147636ENSMUST00000147761ENSMUST00000148343ENSMUSG00000034032ENSMUST00000048493ENSMUST00000099529ENSMUST00000136419ENSMUST00000139311ENSMUST00000184294
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000092445 ENST00000263798 2.857±0.00 N/A 0.099±0.00 4.110±3.04 1.963±1.83 0.142±0.08 0.154±0.10 0.767±0.74 0.219±0.08 0.281±0.13 0.105±0.00 2.066±1.47 0.359±0.05 2.003±0.00
ENST00000559066 N/A N/A 0.378±0.00 6.659±0.83 5.152±0.00 0.343±0.17 0.455±0.00 2.119±2.05 0.466±0.00 0.696±0.30 0.105±0.03 9.046±11.44 3.455±1.78 5.149±0.52
ENST00000559815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.396±0.00 N/A
ENST00000560162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560992 N/A N/A N/A N/A N/A N/A N/A N/A 0.799±0.00 N/A N/A N/A N/A N/A
ENST00000568343 N/A N/A 1.852±0.00 21.706±0.00 1.513±0.00 1.734±0.52 0.836±0.00 4.607±4.35 1.857±0.00 N/A 1.687±0.00 N/A N/A N/A
ENST00000568490 4.212±0.00 0.834±0.00 0.716±0.00 14.811±0.34 6.365±5.08 1.171±0.68 0.478±0.05 4.356±4.12 0.451±0.00 2.616±0.00 0.271±0.00 14.958±9.84 4.185±1.58 15.375±2.48
ENSG00000103932 ENST00000304330 4.363±0.00 2.535±0.00 N/A 1.664±1.06 2.759±0.00 1.121±0.00 4.032±0.00 1.719±0.00 0.425±0.00 1.546±0.21 5.090±3.88 5.176±1.51 3.738±1.49 4.260±0.80
ENST00000561603 N/A 1.050±0.00 0.756±0.00 N/A 0.846±0.00 1.512±0.45 0.697±0.00 1.288±0.00 1.131±0.27 N/A N/A 3.606±1.24 2.075±0.00 N/A
ENST00000561631 N/A N/A N/A 4.729±0.00 N/A N/A N/A 7.038±0.00 N/A N/A 8.454±0.00 N/A N/A N/A
ENST00000562303 N/A N/A N/A N/A 0.554±0.26 N/A N/A 0.519±0.00 N/A N/A N/A N/A N/A N/A
ENST00000563293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565167 N/A 4.069±0.00 N/A 1.845±0.00 N/A 3.761±0.00 2.248±0.00 2.099±0.00 3.821±0.00 1.580±0.00 5.628±0.00 4.713±1.90 2.635±0.14 4.652±0.00
ENST00000566863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569829 N/A N/A N/A N/A N/A 2.290±0.00 N/A N/A 1.493±0.00 N/A N/A N/A N/A N/A
ENSG00000259838 ENST00000566760 N/A 0.074±0.00 N/A 0.205±0.01 N/A 0.034±0.00 N/A N/A N/A N/A N/A 0.078±0.00 0.145±0.00 0.098±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027298 ENSMUST00000028763 1.765±1.66 1.450±0.36 16.216±3.32 10.663±1.52 1.144±0.19 4.173±1.00 0.209±0.07 0.517±0.34 0.143±0.15 4.531±2.45 0.112±0.04 7.753±3.51 2.969±1.37 7.681±3.62
ENSMUST00000110783 N/A 0.757±0.35 N/A N/A N/A 1.827±0.14 N/A N/A 0.087±0.02 N/A N/A 5.063±2.60 0.881±0.00 0.465±0.00
ENSMUST00000130456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147636 N/A N/A N/A N/A 2.185±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.02 N/A N/A 0.474±0.00
ENSMUST00000148343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.223±0.00 N/A N/A N/A
ENSMUSG00000034032 ENSMUST00000048493 2.770±0.62 N/A 3.816±0.36 6.196±1.52 2.668±0.07 N/A 2.395±0.44 1.576±0.66 2.692±1.61 2.191±0.00 3.825±0.73 6.156±2.21 4.077±1.64 2.735±0.45
ENSMUST00000099529 1.020±0.00 N/A 0.810±0.00 N/A 0.912±0.00 N/A N/A 2.317±0.00 0.661±0.28 N/A 0.988±0.24 1.987±0.00 2.215±0.00 1.203±0.23
ENSMUST00000110793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136419 1.207±0.03 5.797±3.11 0.840±0.00 3.225±0.00 2.915±1.56 4.366±1.12 2.793±0.10 3.001±0.82 2.378±1.00 3.034±0.71 N/A 8.715±4.12 4.679±2.63 1.307±0.91
ENSMUST00000139311 1.161±0.01 3.696±0.00 0.835±0.02 1.280±0.00 1.605±0.86 1.806±0.12 0.457±0.00 N/A 0.865±0.20 1.474±0.36 0.755±0.24 4.017±0.00 N/A N/A
ENSMUST00000141800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.266±0.00 N/A

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