| Transcript ID | Bladder | Brain | Muscle | Testis |
|---|---|---|---|---|
| ENSMUST00000113264 | 0.792±0.00 | 0.902±0.19 | 0.002±0.00 | 0.089±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | contactin 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000113264  |
Cntn4-201 |
ENSMUSG00000064293 |
10090 | + |
6:105677745-106699305  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00050H | CIL_00050H_0002 | CGP | 6:104492790-106699310 |
| CIL_0007CD | CIL_0007CD_0002 | CGP | 6:105677660-106745109 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005576 | IEA | extracellular region |
| GO:0005886 | IEA | plasma membrane |
| GO:0007155 | IEA | cell adhesion |
| GO:0007399 | ISS | nervous system development |
| GO:0007420 | ISS | brain development |
| GO:0031175 | ISS | neuron projection development |
| GO:0031225 | IEA | anchored component of membrane |
| GO:0045665 | ISS | negative regulation of neuron differentiation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000091416
|
cntn3a.1-201 | protein_coding | Danio_rerio | 0 | 209 |
|
ENSDART00000131355
|
cntn3a.1-001 | protein_coding | Danio_rerio | 0 | 209 |
|
ENST00000397459
|
CNTN4-002 | protein_coding | Homo_sapiens | 0 | 3059 |
|
ENST00000397461
|
CNTN4-001 | protein_coding | Homo_sapiens | 0 | 5707 |
|
ENST00000418658
|
CNTN4-009 | protein_coding | Homo_sapiens | 0 | 5707 |
|
ENST00000422330
|
CNTN4-004 | protein_coding | Homo_sapiens | 0 | 616 |
|
ENST00000427331
|
CNTN4-201 | protein_coding | Homo_sapiens | 0 | 5710 |
|
ENST00000427741
|
CNTN4-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 2289 |
|
ENST00000430505
|
CNTN4-010 | retained_intron | Homo_sapiens | 0 | 2872 |
|
ENST00000434053
|
CNTN4-011 | protein_coding | Homo_sapiens | 0 | 451 |
|
ENST00000438282
|
CNTN4-006 | retained_intron | Homo_sapiens | 0 | 2074 |
|
ENST00000455083
|
CNTN4-005 | protein_coding | Homo_sapiens | 0 | 326 |
|
ENST00000473058
|
CNTN4-013 | processed_transcript | Homo_sapiens | 0 | 621 |
|
ENST00000473173
|
CNTN4-014 | retained_intron | Homo_sapiens | 0 | 202 |
|
ENST00000473845
|
CNTN4-015 | protein_coding | Homo_sapiens | 0 | 508 |
|
ENST00000475817
|
CNTN4-017 | processed_transcript | Homo_sapiens | 0 | 658 |
|
ENST00000480113
|
CNTN4-012 | retained_intron | Homo_sapiens | 0 | 348 |
|
ENST00000484686
|
CNTN4-016 | retained_intron | Homo_sapiens | 0 | 2736 |
