| Transcript ID | Brain | Muscle | Placenta |
|---|---|---|---|
| ENST00000427331 | 0.861±0.00 | 0.073±0.00 | 0.188±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | contactin 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000427331  |
CNTN4-201 |
ENSG00000144619 |
9606 | + |
3:2571341-3057956  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00050H | CIL_00050H_0001 | CGP | 3:1092576-3057956 |
| CIL_0007CD | CIL_0007CD_0001 | CGP | 3:2098813-3126613 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
| GO:0005576 | IEA | extracellular region |
| GO:0005886 | NAS | plasma membrane |
| GO:0007158 | TAS | neuron cell-cell adhesion |
| GO:0007399 | IMP | nervous system development |
| GO:0007409 | TAS | axonogenesis |
| GO:0007411 | TAS | axon guidance |
| GO:0007413 | TAS | axonal fasciculation |
| GO:0007420 | ISS | brain development |
| GO:0030424 | NAS | axon |
| GO:0031175 | ISS | neuron projection development |
| GO:0031225 | IEA | anchored component of membrane |
| GO:0045665 | IMP | negative regulation of neuron differentiation |
| GO:0048167 | TAS | regulation of synaptic plasticity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000113264
|
Cntn4-201 | protein_coding | Mus_musculus | 0 | 5710 |
|
ENSMUST00000089208
|
Cntn4-001 | protein_coding | Mus_musculus | 0 | 5710 |
|
ENSMUST00000132395
|
Cntn4-008 | processed_transcript | Mus_musculus | 0 | 3042 |
|
ENSMUST00000113260
|
Cntn4-007 | protein_coding | Mus_musculus | 0 | 2876 |
|
ENSMUST00000113261
|
Cntn4-004 | protein_coding | Mus_musculus | 0 | 2876 |
|
ENSMUST00000079416
|
Cntn4-006 | protein_coding | Mus_musculus | 0 | 2872 |
|
ENSMUST00000113258
|
Cntn4-005 | protein_coding | Mus_musculus | 0 | 2074 |
|
ENSMUST00000125904
|
Cntn4-002 | processed_transcript | Mus_musculus | 0 | 1731 |
|
ENSMUST00000142626
|
Cntn4-011 | processed_transcript | Mus_musculus | 0 | 848 |
|
ENSMUST00000123596
|
Cntn4-010 | retained_intron | Mus_musculus | 0 | 392 |
|
ENSMUST00000130040
|
Cntn4-003 | processed_transcript | Mus_musculus | 0 | 355 |
|
ENSDART00000104954
|
cntn3a.2-201 | protein_coding | Danio_rerio | 0.0000000000001 | 84 |
|
ENSDART00000131232
|
cntn3a.2-001 | protein_coding | Danio_rerio | 0.0000000000001 | 84 |
