C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 20, subfamily a, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114202 Cyp20a1-002 ENSMUSG00000049439 10090 + 1:60343323-60372707 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartMuscleOvaryPlacentaENSMUST00000114202
Transcript ID Adipose Adrenal Brain Breast Colon Heart Muscle Ovary Placenta
ENSMUST00000114202 1.990±0.00 2.057±0.18 1.094±0.00 2.023±0.67 1.516±0.42 1.504±0.34 1.600±0.00 2.338±0.73 1.879±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QW CIL_0001QW_0002 CGP 1:60180599-60388060
CIL_0000JP CIL_0000JP_0003 CGP 1:60343323-60481158

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356079 CYP20A1-001 protein_coding Homo_sapiens 0 937
ENST00000429815 CYP20A1-003 protein_coding Homo_sapiens 0 804
ENST00000431118 CYP20A1-005 nonsense_mediated_decay Homo_sapiens 0 560
ENST00000443941 CYP20A1-011 protein_coding Homo_sapiens 0 675
ENST00000449301 CYP20A1-002 nonsense_mediated_decay Homo_sapiens 0 675
ENST00000461371 CYP20A1-004 processed_transcript Homo_sapiens 0 560
ENST00000611416 CYP20A1-201 protein_coding Homo_sapiens 0 675
ENST00000613925 CYP20A1-202 protein_coding Homo_sapiens 0 937

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