C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: brain and reproductive organ-expressed protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114515 Bre-010 ENSMUSG00000052139 10090 + 5:31698030-32084847 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000114515
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000114515 11.249±1.15 22.546±1.00 11.132±6.81 6.039±1.18 9.196±0.89 6.624±1.68 7.383±0.00 11.595±1.01 3.862±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013J CIL_00013J_0002 CGP 5:31526995-31701972
CIL_00013K CIL_00013K_0002 CGP 5:31596935-31701972
CIL_0003JP CIL_0003JP_0003 CGP 5:31624439-32084962
CIL_0003JO CIL_0003JO_0003 CGP 5:31697684-32157831

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342045 BRE-004 protein_coding Homo_sapiens 0 1415
ENST00000344773 BRE-001 protein_coding Homo_sapiens 0 1471
ENST00000361704 BRE-005 protein_coding Homo_sapiens 0 1794
ENST00000379624 BRE-003 protein_coding Homo_sapiens 0 1471
ENST00000379629 BRE-009 protein_coding Homo_sapiens 0 837
ENST00000379632 BRE-002 protein_coding Homo_sapiens 0 1738
ENST00000436924 BRE-006 protein_coding Homo_sapiens 0 521
ENST00000448427 MRPL33-006 nonsense_mediated_decay Homo_sapiens 0 368
ENST00000492702 BRE-007 retained_intron Homo_sapiens 0 235
ENST00000496951 BRE-008 retained_intron Homo_sapiens 0 324
ENST00000603461 BRE-010 processed_transcript Homo_sapiens 0 398
ENST00000604932 BRE-011 non_stop_decay Homo_sapiens 0 472

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