C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | kalirin, RhoGEF kinase | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000114947  |
Kalrn-018 |
ENSMUSG00000061751 |
10090 | - |
16:34177981-34262839  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008HE | CIL_0008HE_0002 | VISTA | 16:33792411-34395018 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005089 | IEA | Rho guanyl-nucleotide exchange factor activity |
| GO:0032321 | IEA | positive regulation of Rho GTPase activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000240874
|
KALRN-005 | protein_coding | Homo_sapiens | 0 | 2876 |
|
ENST00000344204
|
TRIO-001 | protein_coding | Homo_sapiens | 0 | 1264 |
|
ENST00000354186
|
KALRN-004 | protein_coding | Homo_sapiens | 0 | 2708 |
|
ENST00000360013
|
KALRN-201 | protein_coding | Homo_sapiens | 0 | 2876 |
|
ENST00000393501
|
KALRN-008 | retained_intron | Homo_sapiens | 0 | 3454 |
|
ENST00000439170
|
KALRN-009 | protein_coding | Homo_sapiens | 0 | 538 |
|
ENST00000460856
|
KALRN-013 | protein_coding | Homo_sapiens | 0 | 2708 |
|
ENST00000473056
|
KALRN-018 | retained_intron | Homo_sapiens | 0.00001 | 55 |
|
ENST00000484224
|
KALRN-020 | retained_intron | Homo_sapiens | 0 | 1081 |
|
ENST00000494648
|
KALRN-019 | retained_intron | Homo_sapiens | 0 | 595 |
|
ENST00000509967
|
TRIO-008 | protein_coding | Homo_sapiens | 0 | 1264 |
|
ENST00000512070
|
TRIO-010 | nonsense_mediated_decay | Homo_sapiens | 0 | 1264 |
|
ENST00000513206
|
TRIO-002 | protein_coding | Homo_sapiens | 0 | 1264 |
|
ENST00000515144
|
TRIO-003 | retained_intron | Homo_sapiens | 0 | 1264 |
|
ENST00000522553
|
KALRN-011 | retained_intron | Homo_sapiens | 0 | 558 |
