C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trio Rho guanine nucleotide exchange factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000513206 TRIO-002 ENSG00000038382 9606 + 5:14290977-14532128 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000513206
Transcript ID Testis
ENST00000513206 1.101±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0006468 IEA protein phosphorylation
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0035023 IEA regulation of Rho protein signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090247 Trio-201 protein_coding Mus_musculus 0 9354
ENSDART00000087055 trioa-201 protein_coding Danio_rerio 0 4161
ENSDART00000144275 trioa-001 protein_coding Danio_rerio 0 4161
ENSMUST00000114961 Kalrn-012 protein_coding Mus_musculus 0 1437
ENSMUST00000076810 Kalrn-011 protein_coding Mus_musculus 0 1437
ENSMUST00000142817 Kalrn-009 protein_coding Mus_musculus 0 1437
ENSMUST00000114949 Kalrn-003 protein_coding Mus_musculus 0 1315
ENSMUST00000114960 Kalrn-001 protein_coding Mus_musculus 0 1315
ENSMUST00000114947 Kalrn-018 protein_coding Mus_musculus 0 1264
ENSMUST00000114954 Kalrn-007 protein_coding Mus_musculus 0 1206
ENSMUST00000114953 Kalrn-005 protein_coding Mus_musculus 0 1206
ENSMUST00000089655 Kalrn-004 protein_coding Mus_musculus 0 1206
ENSMUST00000151491 Kalrn-002 protein_coding Mus_musculus 0 1144
ENSMUST00000137216 Kalrn-006 retained_intron Mus_musculus 0 252

Loading