C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kalirin, RhoGEF kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393501 KALRN-008 ENSG00000160145 9606 + 3:124384825-124488865 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000393501
Transcript ID Bladder
ENST00000393501 0.451±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114947 Kalrn-018 protein_coding Mus_musculus 0 3454
ENSMUST00000114954 Kalrn-007 protein_coding Mus_musculus 0 2876
ENSMUST00000114953 Kalrn-005 protein_coding Mus_musculus 0 2876
ENSMUST00000089655 Kalrn-004 protein_coding Mus_musculus 0 2876
ENSMUST00000151491 Kalrn-002 protein_coding Mus_musculus 0 2782
ENSMUST00000114961 Kalrn-012 protein_coding Mus_musculus 0 2712
ENSMUST00000076810 Kalrn-011 protein_coding Mus_musculus 0 2712
ENSMUST00000142817 Kalrn-009 protein_coding Mus_musculus 0 2712
ENSMUST00000114949 Kalrn-003 protein_coding Mus_musculus 0 2712
ENSMUST00000114960 Kalrn-001 protein_coding Mus_musculus 0 2712
ENSDART00000114042 kalrna-201 protein_coding Danio_rerio 0 1559
ENSMUST00000090247 Trio-201 protein_coding Mus_musculus 0 1267
ENSDART00000087055 trioa-201 protein_coding Danio_rerio 0 1223
ENSDART00000144275 trioa-001 protein_coding Danio_rerio 0 1223
ENSDART00000000382 triob-201 protein_coding Danio_rerio 0 1114
ENSMUST00000137216 Kalrn-006 retained_intron Mus_musculus 0 1105
ENSDART00000153785 triob-001 protein_coding Danio_rerio 0 684
ENSMUST00000124430 Kalrn-019 processed_transcript Mus_musculus 3e-27 128

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