C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: G protein pathway suppressor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000320548 GPS1-003 ENSG00000169727 9606 + 17:82051875-82057470 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000320548
Transcript ID Testis
ENST00000320548 17.310±4.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043X CIL_00043X_0002 CGP 17:82035136-82051831
CIL_0004VP CIL_0004VP_0001 CGP 17:82047902-82057470
CIL_0004VJ CIL_0004VJ_0001 CGP 17:82050691-82065887

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153678 Gps1-006 nonsense_mediated_decay Mus_musculus 0 1801
ENSMUST00000172809 Gps1-002 protein_coding Mus_musculus 0 1736
ENSMUST00000116305 Gps1-007 protein_coding Mus_musculus 0 1661
ENSMUST00000122292 Gm9816-001 processed_pseudogene Mus_musculus 0 1620
ENSMUST00000100134 Gps1-001 protein_coding Mus_musculus 0 1561
ENSMUST00000156723 Gps1-005 retained_intron Mus_musculus 0 507
ENSMUST00000144519 Gps1-004 retained_intron Mus_musculus 0 289
ENSMUST00000132422 Gps1-003 retained_intron Mus_musculus 0.00000000000004 84

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