C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G protein pathway suppressor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000623691 GPS1-028 ENSG00000169727 9606 + 17:82051897-82057470 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLungMuscleOvaryPlacentaTestisENST00000623691
Transcript ID Bladder Brain Breast Colon Heart Lung Muscle Ovary Placenta Testis
ENST00000623691 1.262±0.00 3.504±0.00 11.017±0.00 6.065±2.06 3.240±1.48 9.995±0.00 34.255±0.00 9.708±5.49 15.097±4.91 21.452±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043X CIL_00043X_0002 CGP 17:82035136-82051831
CIL_0004VP CIL_0004VP_0001 CGP 17:82047902-82057470
CIL_0004VJ CIL_0004VJ_0001 CGP 17:82050691-82065887

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000116305 Gps1-007 protein_coding Mus_musculus 0 1703
ENSMUST00000172809 Gps1-002 protein_coding Mus_musculus 0 1640
ENSMUST00000153678 Gps1-006 nonsense_mediated_decay Mus_musculus 0 1640
ENSMUST00000100134 Gps1-001 protein_coding Mus_musculus 0 1618
ENSMUST00000122292 Gm9816-001 processed_pseudogene Mus_musculus 0 1600
ENSMUST00000156723 Gps1-005 retained_intron Mus_musculus 0 507
ENSMUST00000132422 Gps1-003 retained_intron Mus_musculus 0 353
ENSMUST00000144519 Gps1-004 retained_intron Mus_musculus 0 268

Loading