C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: G protein pathway suppressor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000580141 GPS1-016 ENSG00000169727 9606 + 17:82051901-82056019 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungOvaryPlacentaTestisENST00000580141
Transcript ID Lung Ovary Placenta Testis
ENST00000580141 2.549±0.00 16.840±0.00 21.962±0.00 32.681±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043X CIL_00043X_0002 CGP 17:82035136-82051831
CIL_0004VP CIL_0004VP_0001 CGP 17:82047902-82057470
CIL_0004VJ CIL_0004VJ_0001 CGP 17:82050691-82065887

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000116305 Gps1-007 protein_coding Mus_musculus 0 974
ENSMUST00000100134 Gps1-001 protein_coding Mus_musculus 0 974
ENSMUST00000172809 Gps1-002 protein_coding Mus_musculus 0 966
ENSMUST00000153678 Gps1-006 nonsense_mediated_decay Mus_musculus 0 966
ENSMUST00000122292 Gm9816-001 processed_pseudogene Mus_musculus 0 942
ENSMUST00000144519 Gps1-004 retained_intron Mus_musculus 0 289
ENSMUST00000132422 Gps1-003 retained_intron Mus_musculus 0.00000000000008 82

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