C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117355 Psmd4-004 ENSMUSG00000005625 10090 - 3:95032705-95042543 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLungOvaryENSMUST00000117355
Transcript ID Adrenal Breast Lung Ovary
ENSMUST00000117355 10.036±1.12 6.403±0.00 7.149±0.81 10.916±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008540 IEA proteasome regulatory particle, base subcomplex
GO:0022624 IDA proteasome accessory complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368881 PSMD4-002 protein_coding Homo_sapiens 0 1286
ENST00000368884 PSMD4-001 protein_coding Homo_sapiens 0 1229
ENST00000433951 PSMD4P1-001 processed_pseudogene Homo_sapiens 0 811
ENST00000437736 PSMD4-014 protein_coding Homo_sapiens 0 857
ENST00000445776 PSMD4-008 protein_coding Homo_sapiens 0 326
ENST00000462970 PSMD4-004 retained_intron Homo_sapiens 0 361
ENST00000476855 PSMD4-006 retained_intron Homo_sapiens 0 1057
ENST00000480546 PIPSL-002 processed_transcript Homo_sapiens 0 1086
ENST00000489875 PIPSL-001 transcribed_processed_pseudogene Homo_sapiens 0 1086
ENST00000491857 PSMD4-009 retained_intron Homo_sapiens 0 418

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