C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L23a pseudogene 32
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395315 RPL23AP32-001 ENSG00000237887 9606 + 2:54529343-54529801 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000395315
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000395315 0.579±0.00 0.921±0.00 2.877±0.00 1.305±0.85 2.342±0.79 0.958±0.64 2.914±2.62 0.562±0.23 1.591±1.36 4.707±4.02 0.064±0.00 0.726±0.81 0.103±0.00 0.549±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102483 Rpl23a-001 protein_coding Mus_musculus 0 459
ENSMUST00000180011 Gm8112-201 processed_pseudogene Mus_musculus 0 455
ENSMUST00000096020 Gm10335-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000099431 Gm10132-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000104925 Rpl23a-ps3-201 protein_coding Mus_musculus 0 448
ENSMUST00000120313 Gm5384-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000148102 Gm3362-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000078729 Gm20900-201 processed_pseudogene Mus_musculus 0 429
ENSMUST00000127270 Rpl23a-002 retained_intron Mus_musculus 0 422
ENSMUST00000085589 Gm6177-001 processed_pseudogene Mus_musculus 0 398
ENSMUST00000118777 Rpl23a-ps14-001 processed_pseudogene Mus_musculus 0 372
ENSMUST00000085632 Rpl23a-ps1-001 processed_pseudogene Mus_musculus 0 351
ENSMUST00000105085 Gm10923-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000121605 Gm12322-001 processed_pseudogene Mus_musculus 0 333
ENSMUST00000187124 RP23-466F9.2-001 processed_pseudogene Mus_musculus 0 331
ENSMUST00000178439 Gm21959-201 processed_pseudogene Mus_musculus 0 329
ENSMUST00000121008 Rpl23a-ps4-001 processed_pseudogene Mus_musculus 0 324
ENSMUST00000119136 Gm8217-001 processed_pseudogene Mus_musculus 0 320
ENSMUST00000187732 RP23-349I9.17-001 processed_pseudogene Mus_musculus 0 311
ENSMUST00000187984 RP23-349I9.11-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000105087 Gm3940-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000187331 RP23-466F9.8-001 processed_pseudogene Mus_musculus 0 291
ENSMUST00000189660 RP23-466F9.10-001 processed_pseudogene Mus_musculus 0 289
ENSMUST00000187903 RP23-349I9.24-001 processed_pseudogene Mus_musculus 0 289
ENSMUST00000191583 Rpl23a-ps11-001 processed_pseudogene Mus_musculus 0 287
ENSMUST00000188369 Rpl23a-ps9-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000186898 RP23-466F9.4-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000185244 RP23-349I9.15-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000185511 Rpl23a-ps10-001 processed_pseudogene Mus_musculus 0 259
ENSMUST00000161498 Gm16303-001 processed_pseudogene Mus_musculus 0 239
ENSMUST00000119619 Gm7219-001 processed_pseudogene Mus_musculus 0 209
ENSMUST00000117846 Gm11673-001 processed_pseudogene Mus_musculus 1e-24 117

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