C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calmodulin 2 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000585658 CALM2P1-001 ENSG00000267170 9606 + 17:70241324-70241761 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonLungPlacentaTestisENST00000585658
Transcript ID Adrenal Brain Breast Colon Lung Placenta Testis
ENST00000585658 0.080±0.00 0.076±0.00 0.052±0.00 0.024±0.00 0.198±0.00 0.159±0.00 0.047±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072G CIL_00072G_0001 CGP 17:70168673-72126420

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040440 Calm2-001 protein_coding Mus_musculus 0 455
ENSMUST00000121087 Gm7308-001 processed_pseudogene Mus_musculus 0 427
ENSMUST00000150137 Calm2-002 retained_intron Mus_musculus 0 407
ENSMUST00000118521 Gm14480-001 processed_pseudogene Mus_musculus 0 398
ENSMUST00000143965 Calm2-003 retained_intron Mus_musculus 0 350
ENSMUST00000117133 Gm15720-001 processed_pseudogene Mus_musculus 0 255

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