C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13326
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118730 Gm13326-001 ENSMUSG00000082235 10090 - 2:16978821-16979831 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverOvaryTestisENSMUST00000118730
Transcript ID Brain Liver Ovary Testis
ENSMUST00000118730 0.071±0.00 0.024±0.02 0.122±0.01 0.157±0.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 968
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 747
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 953
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 968
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 968
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 399
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 760
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 667
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 870
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 470
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 710
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 508
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 442
ENST00000449411 GAPDHP74-001 processed_pseudogene Homo_sapiens 0 246
ENST00000450472 GAPDHP14-001 processed_pseudogene Homo_sapiens 0 333
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 878
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 501
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 747
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 747
ENST00000489113 GAPDHP47-001 processed_pseudogene Homo_sapiens 0 512
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 658
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 712
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 811
ENST00000508195 RP11-616K22.1-001 processed_pseudogene Homo_sapiens 0 453
ENST00000511530 GAPDHP71-001 processed_pseudogene Homo_sapiens 0 712
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 732
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 436
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 878

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