C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6322
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118789 Gm6322-001 ENSMUSG00000082018 10090 - X:139676087-139677489 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000118789
Transcript ID Adipose Bladder Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000118789 0.035±0.00 0.031±0.00 0.074±0.06 0.028±0.00 0.029±0.00 0.024±0.03 0.028±0.00 0.103±0.05 0.034±0.00 0.032±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AC CIL_0006AC_0002 CGP X:139563316-139753405

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 298
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 979
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 754
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 968
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 979
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 979
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 466
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 795
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 778
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 701
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 699
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 913
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 652
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 534
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 752
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 525
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 553
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 641
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 942
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 488
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 754
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 754
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 702
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 745
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 776
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 773
ENST00000515281 GAPDHP70-001 processed_pseudogene Homo_sapiens 0 680
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 503
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 867

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