C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11517
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119491 Gm11517-001 ENSMUSG00000081249 10090 - 11:96795439-96795825 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119491
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119491 2.764±1.45 1.171±0.15 1.007±0.27 1.487±0.72 3.217±1.16 2.449±1.41 0.918±0.69 1.268±0.36 0.650±0.36 5.914±1.03 2.450±0.28 9.652±5.20 2.187±1.30 2.141±1.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097B CIL_00097B_0002 VISTA 11:96441475-97042608
CIL_0007WA CIL_0007WA_0002 VISTA 11:96526222-97127190
CIL_0007RQ CIL_0007RQ_0002 VISTA 11:96583318-97187851

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000035235 UBC-001 protein_coding Danio_rerio 0 265
ENSDART00000123908 UBC-201 protein_coding Danio_rerio 0 254
ENSDART00000097583 ubb-001 protein_coding Danio_rerio 0 250
ENST00000339647 UBC-001 protein_coding Homo_sapiens 0 281
ENST00000408928 AC099535.4-001 processed_pseudogene Homo_sapiens 0 364
ENST00000430157 UBA52-002 protein_coding Homo_sapiens 0 488
ENST00000442744 UBA52-001 protein_coding Homo_sapiens 0 488
ENST00000535131 UBC-015 protein_coding Homo_sapiens 0 281
ENST00000535859 UBC-013 protein_coding Homo_sapiens 0 281
ENST00000536661 UBC-010 processed_transcript Homo_sapiens 0 217
ENST00000536769 UBC-007 protein_coding Homo_sapiens 0 281
ENST00000538617 UBC-003 protein_coding Homo_sapiens 0 281
ENST00000540351 UBC-009 protein_coding Homo_sapiens 0 281
ENST00000540700 UBC-011 protein_coding Homo_sapiens 0 281
ENST00000541272 UBC-016 protein_coding Homo_sapiens 0 281
ENST00000541645 UBC-014 protein_coding Homo_sapiens 0 281
ENST00000542416 UBC-008 protein_coding Homo_sapiens 0 226
ENST00000544481 UBC-017 processed_transcript Homo_sapiens 0 272
ENST00000546120 UBC-201 protein_coding Homo_sapiens 0 281
ENST00000546271 UBC-012 protein_coding Homo_sapiens 0 281
ENST00000595158 UBA52-009 protein_coding Homo_sapiens 0 488
ENST00000595683 UBA52-004 protein_coding Homo_sapiens 0 488
ENST00000596273 UBA52-003 protein_coding Homo_sapiens 0 488
ENST00000596304 UBA52-005 protein_coding Homo_sapiens 0 488
ENST00000597451 UBA52-011 protein_coding Homo_sapiens 0 488
ENST00000598780 UBA52-008 protein_coding Homo_sapiens 0 488
ENST00000599551 UBA52-010 protein_coding Homo_sapiens 0 488
ENST00000599595 UBA52-014 protein_coding Homo_sapiens 0 488

Loading