C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000542416 UBC-008 ENSG00000150991 9606 - 12:124913587-124917368 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00006N CIL_00006N_0002 CGP 12:124776856-124917368

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165126 Uba52-201 protein_coding Mus_musculus 0 254
ENSMUST00000124967 Uba52-006 protein_coding Mus_musculus 0 254
ENSMUST00000135446 Uba52-002 protein_coding Mus_musculus 0 254
ENSMUST00000081940 Uba52-005 protein_coding Mus_musculus 0 254
ENSMUST00000125184 Uba52-001 protein_coding Mus_musculus 0 254
ENSMUST00000129909 Uba52-003 protein_coding Mus_musculus 0 254
ENSMUST00000140679 Uba52-004 protein_coding Mus_musculus 0 254
ENSMUST00000138260 Kxd1-007 protein_coding Mus_musculus 0 254
ENSMUST00000121623 Kxd1-005 protein_coding Mus_musculus 0 254
ENSMUST00000089430 Gm11808-001 protein_coding Mus_musculus 0 254
ENSMUST00000118642 Gm7331-001 processed_pseudogene Mus_musculus 0 248
ENSMUST00000082002 Gm7808-201 protein_coding Mus_musculus 0 248
ENSDART00000099105 ubc-001 protein_coding Danio_rerio 0 243
ENSMUST00000081864 Gm5239-201 protein_coding Mus_musculus 0 237
ENSMUST00000119491 Gm11517-001 processed_pseudogene Mus_musculus 0 226
ENSMUST00000118611 Gm12328-001 processed_pseudogene Mus_musculus 2.8026e-45 185
ENSMUST00000127793 Uba52-007 retained_intron Mus_musculus 4e-34 148

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