C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 9439
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119554 Gm9439-001 ENSMUSG00000081641 10090 + X:21504054-21505466 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaTestisENSMUST00000119554
Transcript ID Brain Placenta Testis
ENSMUST00000119554 0.023±0.01 0.005±0.00 0.074±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000712 CIL_000712_0002 CGP X:21484544-21742355

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 773
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 612
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 773
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 773
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 773
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 608
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 632
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 427
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 588
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 512
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 723
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 398
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 575
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 368
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 313
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 499
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 387
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 612
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 612
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 542
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 549
ENST00000511530 GAPDHP71-001 processed_pseudogene Homo_sapiens 0 610
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 608
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 706

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