C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif-containing 24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120238 Trim24-003 ENSMUSG00000029833 10090 + 6:37900487-37965932 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000120238
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000120238 3.262±0.26 3.804±0.00 2.858±0.17 2.481±0.00 1.423±0.35 2.357±0.63 2.439±0.74 1.247±0.32 5.000±0.89 1.858±0.00 17.903±3.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002Q4 CIL_0002Q4_0002 CGP 6:37530173-37966296
CIL_0002Q3 CIL_0002Q3_0002 CGP 6:37870811-38046996

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003682 IDA chromatin binding
GO:0004672 IDA protein kinase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005719 IDA nuclear euchromatin
GO:0005726 IDA perichromatin fibrils
GO:0005737 IDA cytoplasm
GO:0006468 IDA protein phosphorylation
GO:0008270 IEA zinc ion binding
GO:0008285 IGI negative regulation of cell proliferation
GO:0010628 IGI positive regulation of gene expression
GO:0016922 IDA ligand-dependent nuclear receptor binding
GO:0043565 IDA sequence-specific DNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IGI positive regulation of transcription, DNA-templated
GO:0046777 IDA protein autophosphorylation
GO:0055074 IMP calcium ion homeostasis
GO:0070562 IMP regulation of vitamin D receptor signaling pathway
GO:1901796 IGI regulation of signal transduction by p53 class mediator

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343526 TRIM24-001 protein_coding Homo_sapiens 0 3570
ENST00000415680 TRIM24-007 protein_coding Homo_sapiens 0 1964
ENST00000464210 TRIM24-010 processed_transcript Homo_sapiens 0 486
ENST00000485318 TRIM24-011 processed_transcript Homo_sapiens 7e-32 141
ENST00000493595 TRIM24-012 processed_transcript Homo_sapiens 0 497
ENST00000497516 TRIM24-014 processed_transcript Homo_sapiens 0 1426
ENST00000620194 TRIM24-201 protein_coding Homo_sapiens 0 1964

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