C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12304
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120312 Gm12304-001 ENSMUSG00000083924 10090 - 11:68095580-68095964 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyLiverOvaryPlacentaENSMUST00000120312
Transcript ID Adipose Bladder Brain Breast Kidney Liver Ovary Placenta
ENSMUST00000120312 0.374±0.20 0.036±0.00 0.333±0.00 0.517±0.00 0.318±0.00 0.225±0.15 0.632±0.22 0.123±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000075402 rpl31-201 protein_coding Danio_rerio 0.0000005 58
ENSDART00000148688 rpl31-003 retained_intron Danio_rerio 0.0000005 58
ENSDART00000149851 rpl31-002 protein_coding Danio_rerio 0.0000005 58
ENSDART00000148984 rpl31-004 retained_intron Danio_rerio 0.0000005 58
ENSDART00000149554 rpl31-001 protein_coding Danio_rerio 0.0000005 58
ENST00000414975 RP11-681L4.1-001 processed_pseudogene Homo_sapiens 1e-28 130
ENST00000420238 AC090018.1-001 processed_pseudogene Homo_sapiens 3e-34 148
ENST00000434369 AC069213.4-001 processed_pseudogene Homo_sapiens 2e-40 169
ENST00000449897 AC140076.1-001 processed_pseudogene Homo_sapiens 8e-40 167
ENST00000462248 RP11-147I3.1-001 transcribed_processed_pseudogene Homo_sapiens 0 193
ENST00000473673 RP11-364M6.1-001 processed_pseudogene Homo_sapiens 0 202
ENST00000487111 RP11-147I3.1-003 processed_transcript Homo_sapiens 1e-29 134
ENST00000525104 RP11-147I3.1-002 processed_transcript Homo_sapiens 0 193
ENST00000529570 RP11-147I3.1-004 processed_transcript Homo_sapiens 0 193

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