C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000529570 RP11-147I3.1-004 ENSG00000241170 9606 + 11:74911375-74920006 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleOvaryPlacentaTestisENST00000529570
Transcript ID Brain Liver Muscle Ovary Placenta Testis
ENST00000529570 0.236±0.00 1.565±0.00 0.106±0.00 0.514±0.00 0.209±0.00 0.314±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I3 CIL_0008I3_0001 VISTA 11:74770295-75374240

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086535 Rpl31-201 protein_coding Mus_musculus 0 401
ENSMUST00000086596 Rpl31-ps9-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000119898 Rpl31-ps11-001 processed_pseudogene Mus_musculus 0 383
ENSMUST00000181935 Rpl31-ps8-001 processed_pseudogene Mus_musculus 0 383
ENSMUST00000179954 Rpl31-203 protein_coding Mus_musculus 0 383
ENSMUST00000178079 Rpl31-202 protein_coding Mus_musculus 0 383
ENSMUST00000181130 Rpl31-ps16-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000119957 Rpl31-ps12-001 processed_pseudogene Mus_musculus 0 377
ENSMUST00000180629 Rpl31-ps7-001 processed_pseudogene Mus_musculus 0 368
ENSMUST00000143596 Rpl31-ps14-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000097040 Rpl31-ps17-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000079114 Rpl31-ps4-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000180885 Rpl31-ps18-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000085128 Rpl31-ps1-201 processed_pseudogene Mus_musculus 0 344
ENSMUST00000181857 Rpl31-ps15-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000180929 Rp31-ps19-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000181182 Rpl31-ps21-001 processed_pseudogene Mus_musculus 0 289
ENSMUST00000118086 Rpl31-ps5-001 processed_pseudogene Mus_musculus 0 270
ENSMUST00000117961 Rpl31-ps22-001 processed_pseudogene Mus_musculus 0 268
ENSMUST00000191416 RP23-416O18.2-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000181350 Rpl31-ps24-001 processed_pseudogene Mus_musculus 0 231
ENSMUST00000120312 Gm12304-001 processed_pseudogene Mus_musculus 0 193

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