C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L31
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000148688 rpl31-003 ENSDARG00000053365 7955 - 9:57954509-57957993 retained_intron

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyENSDART00000148688
Transcript ID Heart Kidney
ENSDART00000148688 0.138±0.00 0.529±0.23

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060994 Rpl31-ps13-001 processed_pseudogene Mus_musculus 0 230
ENSMUST00000085128 Rpl31-ps1-201 processed_pseudogene Mus_musculus 0 211
ENSMUST00000086535 Rpl31-201 protein_coding Mus_musculus 0 255
ENSMUST00000086596 Rpl31-ps9-001 processed_pseudogene Mus_musculus 0 261
ENSMUST00000097040 Rpl31-ps17-001 processed_pseudogene Mus_musculus 0 239
ENSMUST00000116034 Rpl31-ps10-001 processed_pseudogene Mus_musculus 0 233
ENSMUST00000119898 Rpl31-ps11-001 processed_pseudogene Mus_musculus 0 248
ENSMUST00000119957 Rpl31-ps12-001 processed_pseudogene Mus_musculus 0 239
ENSMUST00000120312 Gm12304-001 processed_pseudogene Mus_musculus 0.0000005 58
ENSMUST00000143596 Rpl31-ps14-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000178079 Rpl31-202 protein_coding Mus_musculus 0 255
ENSMUST00000179954 Rpl31-203 protein_coding Mus_musculus 0 255
ENSMUST00000181130 Rpl31-ps16-001 processed_pseudogene Mus_musculus 0 231
ENSMUST00000181350 Rpl31-ps24-001 processed_pseudogene Mus_musculus 5e-32 141
ENSMUST00000181857 Rpl31-ps15-001 processed_pseudogene Mus_musculus 0 198
ENSMUST00000181935 Rpl31-ps8-001 processed_pseudogene Mus_musculus 0 255
ENSMUST00000191562 RP24-82I5.2-001 processed_pseudogene Mus_musculus 1e-27 126

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