C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L10A, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120360 Rpl10a-ps1-001 ENSMUSG00000084416 10090 - 1:64993951-64994604 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120360
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120360 69.738±29.02 39.052±11.75 71.545±4.85 39.562±7.46 32.039±13.85 30.330±3.56 12.471±2.18 23.811±2.22 41.041±38.72 19.759±1.03 3.868±1.32 76.120±52.85 10.846±13.85 7.053±0.58

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000136547 rpl10a-002 processed_transcript Danio_rerio 0 577
ENSDART00000062983 rpl10a-001 protein_coding Danio_rerio 0 577
ENSDART00000138427 rpl10a-004 nonsense_mediated_decay Danio_rerio 3e-21 106
ENSDART00000141110 rpl10a-003 retained_intron Danio_rerio 3e-21 106
ENST00000322203 RPL10A-001 protein_coding Homo_sapiens 0 813
ENST00000392713 RP1-228H13.2-001 processed_pseudogene Homo_sapiens 0 348
ENST00000426688 RP3-445O10.1-001 processed_pseudogene Homo_sapiens 0 660
ENST00000464112 RPL10A-002 processed_transcript Homo_sapiens 0 808
ENST00000467020 RPL10A-005 processed_transcript Homo_sapiens 0 571
ENST00000472730 RPL10AP6-001 processed_pseudogene Homo_sapiens 0 756
ENST00000478340 RPL10A-004 processed_transcript Homo_sapiens 0 568
ENST00000479243 RPL10AP2-001 processed_pseudogene Homo_sapiens 0 736
ENST00000486625 CTD-2161E19.1-001 processed_pseudogene Homo_sapiens 0 682
ENST00000490335 RPL10A-003 processed_transcript Homo_sapiens 0 544

Loading