C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 16016
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120831 Gm16016-001 ENSMUSG00000083538 10090 + 3:57528232-57528781 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartKidneyLiverLungMuscleOvaryENSMUST00000120831
Transcript ID Adipose Adrenal Breast Heart Kidney Liver Lung Muscle Ovary
ENSMUST00000120831 0.382±0.05 0.273±0.00 0.198±0.08 0.222±0.03 0.248±0.16 0.017±0.00 0.247±0.14 0.109±0.01 0.309±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002R1 CIL_0002R1_0002 CGP 3:57425314-57575910
CIL_0002R8 CIL_0002R8_0002 CGP 3:57455649-57651715

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272930 UBE2F-001 protein_coding Homo_sapiens 0 566
ENST00000409332 UBE2F-004 protein_coding Homo_sapiens 0 370
ENST00000409633 UBE2F-011 protein_coding Homo_sapiens 0 457
ENST00000409953 UBE2F-020 protein_coding Homo_sapiens 0 470
ENST00000414443 UBE2F-201 protein_coding Homo_sapiens 0 370
ENST00000416292 UBE2F-010 protein_coding Homo_sapiens 0 357
ENST00000417231 UBE2F-013 nonsense_mediated_decay Homo_sapiens 0 468
ENST00000433241 UBE2F-016 nonsense_mediated_decay Homo_sapiens 0 368
ENST00000433568 UBE2F-008 nonsense_mediated_decay Homo_sapiens 0.0000000000002 81
ENST00000434137 UBE2F-023 protein_coding Homo_sapiens 0 379
ENST00000434655 UBE2F-017 protein_coding Homo_sapiens 0 553
ENST00000439338 UBE2F-019 nonsense_mediated_decay Homo_sapiens 0 429
ENST00000439780 UBE2F-018 nonsense_mediated_decay Homo_sapiens 0 368
ENST00000448502 UBE2F-009 protein_coding Homo_sapiens 0 220
ENST00000449191 UBE2F-SCLY-002 nonsense_mediated_decay Homo_sapiens 0 281
ENST00000454786 UBE2F-002 nonsense_mediated_decay Homo_sapiens 0 370
ENST00000455999 UBE2F-012 nonsense_mediated_decay Homo_sapiens 0 281
ENST00000612130 UBE2F-202 protein_coding Homo_sapiens 0 566

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