C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11658
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120913 Gm11658-001 ENSMUSG00000081524 10090 - 11:109159187-109160194 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverMuscleENSMUST00000120913
Transcript ID Bladder Brain Breast Heart Kidney Liver Muscle
ENSMUST00000120913 0.060±0.00 0.014±0.00 0.060±0.02 0.031±0.00 0.031±0.00 0.033±0.01 0.053±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UC CIL_0007UC_0002 VISTA 11:108969057-109571054

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 351
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 994
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 795
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 994
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 994
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 994
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 730
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 732
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 918
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 821
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 568
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 449
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 568
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 654
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 521
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 562
ENST00000447061 GAPDHP25-001 processed_pseudogene Homo_sapiens 0 737
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 680
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 946
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 204
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 795
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 795
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 697
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 732
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 785
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 388
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 824
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 808
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 520
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 730
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 484
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 926

Loading