C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000437248 RP11-435F13.2-001 ENSG00000238085 9606 - 1:240998451-240998794 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleTestisENST00000437248
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Testis
ENST00000437248 0.062±0.00 0.396±0.00 0.149±0.00 0.141±0.00 0.318±0.00 0.206±0.00 0.120±0.00 0.527±0.00 0.970±0.00 0.061±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000L0 CIL_0000L0_0002 CGP 1:240489573-241357230
CIL_0000L5 CIL_0000L5_0002 CGP 1:240775514-241519761

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180255 Gm11942-001 processed_pseudogene Mus_musculus 0 327
ENSMUST00000172206 Gm17511-201 protein_coding Mus_musculus 0 327
ENSMUST00000008036 Rplp1-201 protein_coding Mus_musculus 0 327
ENSMUST00000073722 Gm10073-201 protein_coding Mus_musculus 0 322
ENSMUST00000118208 Gm13777-001 processed_pseudogene Mus_musculus 0 274
ENSMUST00000118238 Gm13229-001 processed_pseudogene Mus_musculus 0 255
ENSMUST00000117496 Gm13035-001 processed_pseudogene Mus_musculus 0 255
ENSMUST00000179385 Gm13144-001 processed_pseudogene Mus_musculus 0 255
ENSMUST00000119875 Gm13163-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000177803 Gm13249-001 processed_pseudogene Mus_musculus 0 250
ENSMUST00000118035 Gm13137-001 processed_pseudogene Mus_musculus 0 239
ENSMUST00000164001 Gm5244-001 transcribed_processed_pseudogene Mus_musculus 0 235
ENSMUST00000189517 Gm5244-002 processed_transcript Mus_musculus 0 235
ENSMUST00000120994 Gm13246-001 processed_pseudogene Mus_musculus 0 231

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