C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 14113
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121399 Gm14113-001 ENSMUSG00000084371 10090 + 2:147289755-147290730 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENSMUST00000121399
Transcript ID Brain Testis
ENSMUST00000121399 0.042±0.02 0.030±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VN CIL_0008VN_0002 VISTA 2:146880290-147481581
CIL_0001U0 CIL_0001U0_0002 CGP 2:147177546-147393295

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 848
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 593
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 828
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 848
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 848
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 597
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 377
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 420
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 403
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 737
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 645
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 394
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 617
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 516
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 239
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 399
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 219
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 784
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 381
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 593
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 593
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 571
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 580
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 645
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 638
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 479
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 725

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