C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lactate dehydrogenase A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000460405 LDHA-008 ENSG00000134333 9606 + 11:18398866-18403784 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000445 CIL_000445_0001 CGP 11:18322295-18408425
CIL_000369 CIL_000369_0001 CGP 11:18394388-18452058

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005051 Ldha-002 protein_coding Mus_musculus 0 569
ENSMUST00000092621 Ldha-006 protein_coding Mus_musculus 0 569
ENSMUST00000048209 Ldha-001 protein_coding Mus_musculus 0 569
ENSMUST00000147535 Ldha-003 protein_coding Mus_musculus 0 569
ENSMUST00000119390 Ldha-ps-001 processed_pseudogene Mus_musculus 0 512
ENSMUST00000118722 Ldha-ps2-001 processed_pseudogene Mus_musculus 0 496
ENSMUST00000188353 RP24-77I21.1-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000187574 RP23-251N10.2-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000132157 Ldha-008 retained_intron Mus_musculus 0 448
ENSMUST00000121188 Gm13365-001 processed_pseudogene Mus_musculus 0 375
ENSMUST00000121445 Gm11980-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000117722 Gm14676-001 processed_pseudogene Mus_musculus 0 209

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