C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | lactate dehydrogenase A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000541097  |
LDHA-019 |
ENSG00000134333 |
9606 | + |
11:18394563-18407158  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000445 | CIL_000445_0001 | CGP | 11:18322295-18408425 |
| CIL_000369 | CIL_000369_0001 | CGP | 11:18394388-18452058 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0016491 | IEA | oxidoreductase activity |
| GO:0016616 | IEA | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| GO:0044262 | IEA | cellular carbohydrate metabolic process |
| GO:0055114 | IEA | oxidation-reduction process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000132157
|
Ldha-008 | retained_intron | Mus_musculus | 0 | 326 |
|
ENSMUST00000005051
|
Ldha-002 | protein_coding | Mus_musculus | 0 | 326 |
|
ENSMUST00000092621
|
Ldha-006 | protein_coding | Mus_musculus | 0 | 326 |
|
ENSMUST00000048209
|
Ldha-001 | protein_coding | Mus_musculus | 0 | 326 |
|
ENSMUST00000147535
|
Ldha-003 | protein_coding | Mus_musculus | 0 | 326 |
|
ENSMUST00000119515
|
Gm11814-001 | processed_pseudogene | Mus_musculus | 0 | 313 |
|
ENSMUST00000118722
|
Ldha-ps2-001 | processed_pseudogene | Mus_musculus | 0 | 296 |
|
ENSMUST00000188353
|
RP24-77I21.1-001 | processed_pseudogene | Mus_musculus | 0 | 292 |
|
ENSMUST00000117722
|
Gm14676-001 | processed_pseudogene | Mus_musculus | 0 | 278 |
|
ENSMUST00000133062
|
Ldha-007 | processed_transcript | Mus_musculus | 0 | 276 |
|
ENSMUST00000120376
|
Gm13315-001 | processed_pseudogene | Mus_musculus | 0 | 274 |
|
ENSMUST00000125862
|
Ldha-004 | processed_transcript | Mus_musculus | 0 | 267 |
|
ENSMUST00000119390
|
Ldha-ps-001 | processed_pseudogene | Mus_musculus | 0 | 265 |
|
ENSMUST00000187574
|
RP23-251N10.2-001 | processed_pseudogene | Mus_musculus | 0 | 255 |
|
ENSMUST00000121445
|
Gm11980-001 | processed_pseudogene | Mus_musculus | 0 | 254 |
|
ENSMUST00000121188
|
Gm13365-001 | processed_pseudogene | Mus_musculus | 0 | 235 |
|
ENSMUST00000124696
|
Ldha-005 | retained_intron | Mus_musculus | 4.06377e-44 | 182 |
