C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytotoxic granule-associated RNA binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123002 Tia1-018 ENSMUSG00000071337 10090 + 6:86419929-86424423 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089T CIL_00089T_0002 VISTA 6:86179085-86780169

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282574 TIA1-006 protein_coding Homo_sapiens 7e-25 121
ENST00000361692 TIA1-023 protein_coding Homo_sapiens 7e-27 124
ENST00000415783 TIA1-002 protein_coding Homo_sapiens 8e-25 121
ENST00000416149 TIA1-004 protein_coding Homo_sapiens 1e-25 121
ENST00000433529 TIA1-001 protein_coding Homo_sapiens 8e-25 121
ENST00000445587 TIA1-003 protein_coding Homo_sapiens 3e-25 121
ENST00000454815 TIA1-013 protein_coding Homo_sapiens 2e-25 121
ENST00000474699 TIA1-015 retained_intron Homo_sapiens 1e-25 121
ENST00000474809 TIA1-009 nonsense_mediated_decay Homo_sapiens 0 355
ENST00000477044 TIA1-008 nonsense_mediated_decay Homo_sapiens 1e-26 124
ENST00000477415 TIA1-017 retained_intron Homo_sapiens 9e-26 121
ENST00000482876 TIA1-018 processed_transcript Homo_sapiens 0.000000000008 75
ENST00000496096 TIA1-014 retained_intron Homo_sapiens 0 361

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