C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif, single stranded interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123046 Rbms1-004 ENSMUSG00000026970 10090 - 2:60753560-60762321 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000123046
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000123046 28.786±1.83 21.759±0.00 46.385±6.83 15.614±3.36 12.396±3.55 15.367±3.46 14.471±3.14 56.587±5.50 39.050±5.65 53.278±15.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TW CIL_0005TW_0002 CGP 2:60598292-60963192
CIL_0005KZ CIL_0005KZ_0002 CGP 2:60750193-61654171

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000348849 RBMS1-001 protein_coding Homo_sapiens 0 651
ENST00000392753 RBMS1-201 protein_coding Homo_sapiens 0 651
ENST00000409075 RBMS1-006 protein_coding Homo_sapiens 0 654
ENST00000409289 RBMS1-009 protein_coding Homo_sapiens 0 654
ENST00000409972 RBMS1-007 protein_coding Homo_sapiens 0 654
ENST00000417216 RBMS1P1-001 processed_pseudogene Homo_sapiens 0 603
ENST00000464200 RBMS1-011 retained_intron Homo_sapiens 0 233
ENST00000474147 RBMS1-003 retained_intron Homo_sapiens 0 224
ENST00000474820 RBMS1-002 processed_transcript Homo_sapiens 0 429
ENST00000475103 RBMS1-010 processed_transcript Homo_sapiens 5e-27 124
ENST00000477965 RBMS1-004 retained_intron Homo_sapiens 0 427
ENST00000490637 RBMS1-008 retained_intron Homo_sapiens 0 427
ENST00000491781 RBMS1-005 retained_intron Homo_sapiens 0 231

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