C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005KZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000153250-ENSG00000136560 CGP 9606 2:160272151-161236221
GeneTranscriptPositionBiotype
ENSG00000136560 (TANK)
TRAF family member-associated NFKB activator 		ENST00000259075 (TANK-001) 161136908-161236187 protein_coding
ENST00000392749 (TANK-002) 161160297-161236172 protein_coding
ENST00000402568 (TANK-014) 161160349-161235381 protein_coding
ENST00000403609 (TANK-003) 161179621-161204979 protein_coding
ENST00000405852 (TANK-004) 161160437-161236221 protein_coding
ENST00000406287 (TANK-008) 161160349-161235381 protein_coding
ENST00000429217 (TANK-016) 161160344-161231017 protein_coding
ENST00000432002 (TANK-015) 161136927-161224637 protein_coding
ENST00000432692 (TANK-021) 161160428-161224640 nonsense_mediated_decay
ENST00000437623 (TANK-023) 161223915-161236166 protein_coding
ENST00000439442 (TANK-020) 161231186-161235648 protein_coding
ENST00000440506 (TANK-006) 161160299-161204781 protein_coding
ENST00000441987 (TANK-017) 161160428-161204774 nonsense_mediated_decay
ENST00000456358 (TANK-012) 161160726-161224644 protein_coding
ENST00000457887 (TANK-022) 161160406-161224746 nonsense_mediated_decay
ENST00000461338 (TANK-007) 161160344-161163518 processed_transcript
ENST00000463502 (TANK-005) 161136966-161180085 processed_transcript
ENST00000468831 (TANK-013) 161179483-161231175 retained_intron
ENST00000470324 (TANK-019) 161223400-161224705 processed_transcript
ENST00000477952 (TANK-009) 161160427-161161651 retained_intron
ENST00000483622 (TANK-011) 161160457-161161666 retained_intron
ENST00000489393 (TANK-018) 161179653-161197528 processed_transcript
ENST00000494976 (TANK-010) 161160432-161162890 processed_transcript
ENSG00000153250 (RBMS1)
RNA binding motif, single stranded interacting protein 1 		ENST00000348849 (RBMS1-001) 160272151-160493794 protein_coding
ENST00000392753 (RBMS1-201) 160272152-160367526 protein_coding
ENST00000409075 (RBMS1-006) 160274460-160408609 protein_coding
ENST00000409289 (RBMS1-009) 160274460-160416178 protein_coding
ENST00000409972 (RBMS1-007) 160274520-160407889 protein_coding
ENST00000428519 (RBMS1-015) 160303408-160416178 protein_coding
ENST00000464200 (RBMS1-011) 160275399-160277372 retained_intron
ENST00000474147 (RBMS1-003) 160274460-160279766 retained_intron
ENST00000474820 (RBMS1-002) 160272151-160493379 processed_transcript
ENST00000475103 (RBMS1-010) 160274480-160276685 processed_transcript
ENST00000477486 (RBMS1-014) 160366913-160492969 retained_intron
ENST00000477965 (RBMS1-004) 160274540-160283100 retained_intron
ENST00000490637 (RBMS1-008) 160274518-160284867 retained_intron
ENST00000491781 (RBMS1-005) 160284261-160493482 retained_intron
ENST00000492283 (RBMS1-012) 160302504-160318203 processed_transcript
ENSG00000224467 (AC009313.1)
 ENST00000425470 (AC009313.1-001) 161096231-161160224 antisense
ENSG00000232337 (AC009313.2)
 ENST00000417893 (AC009313.2-001) 161048606-161050546 processed_pseudogene
ENSG00000244372 (RN7SL423P)
RNA, 7SL, cytoplasmic 423, pseudogene 		ENST00000486202 (RN7SL423P-201) 160877547-160877850 misc_RNA
ENSG00000279844 (RP11-20F18.1)
 ENST00000623826 (RP11-20F18.1-001) 160849313-160850676 TEC
CIL_0005KZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026970-ENSMUSG00000064289 CGP 10090 2:60750193-61654171
GeneTranscriptPositionBiotype
ENSMUSG00000026970 (Rbms1)
RNA binding motif, single stranded interacting protein 1 		ENSMUST00000028347 (Rbms1-001) 60750193-60963192 protein_coding
ENSMUST00000112509 (Rbms1-002) 60752722-60881470 protein_coding
ENSMUST00000123046 (Rbms1-004) 60753560-60762321 processed_transcript
ENSMUST00000125485 (Rbms1-008) 60888212-60888508 processed_transcript
ENSMUST00000128866 (Rbms1-006) 60888424-60888996 processed_transcript
ENSMUST00000132529 (Rbms1-007) 60842297-60889030 processed_transcript
ENSMUST00000151846 (Rbms1-009) 60842297-60888055 processed_transcript
ENSMUST00000153555 (Rbms1-003) 60755416-60780941 processed_transcript
ENSMUST00000164147 (Rbms1-201) 60751953-60881438 protein_coding
ENSMUSG00000064289 (Tank)
TRAF family member-associated Nf-kappa B activator 		ENSMUST00000078074 (Tank-201) 61578586-61654171 protein_coding
ENSMUST00000112494 (Tank-003) 61593136-61651799 protein_coding
ENSMUST00000112495 (Tank-002) 61593077-61654171 protein_coding
ENSMUST00000112501 (Tank-202) 61593097-61654171 protein_coding
ENSMUST00000112502 (Tank-001) 61578585-61654171 protein_coding
ENSMUST00000136688 (Tank-006) 61578611-61654090 processed_transcript
ENSMUST00000139533 (Tank-005) 61593164-61615140 processed_transcript
ENSMUST00000141544 (Tank-004) 61593165-61654090 processed_transcript
ENSMUST00000143515 (Tank-007) 61627721-61646190 processed_transcript
ENSMUST00000145632 (Tank-008) 61578611-61643907 processed_transcript
ENSMUST00000154693 (Tank-009) 61643831-61649977 processed_transcript
ENSMUSG00000075325 (Gm13582)
predicted gene 13582 		ENSMUST00000146034 (Gm13582-001) 60964376-60975151 lincRNA
ENSMUSG00000080547 (Gm22712)
predicted gene, 22712 		ENSMUST00000116897 (Gm22712-201) 60954060-60954133 miRNA
ENSMUSG00000083334 (Gm13579)
predicted gene 13579 		ENSMUST00000118519 (Gm13579-001) 61030351-61030970 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005KZ_0001ENSG00000136560ENST00000259075ENST00000392749ENST00000405852ENST00000406287ENST00000429217ENST00000439442ENST00000440506ENST00000461338ENST00000463502ENSG00000153250ENST00000348849ENST00000392753ENST00000409289ENST00000409972ENST00000474147ENST00000474820ENST00000490637ENSG00000224467ENST00000425470ENSG00000232337ENST00000417893ENSG00000244372ENST00000486202ENSG00000279844ENST00000623826CIL_0005KZ_0002ENSMUSG00000026970ENSMUST00000028347ENSMUST00000112509ENSMUST00000123046ENSMUST00000153555ENSMUST00000164147ENSMUSG00000064289ENSMUST00000078074ENSMUST00000112494ENSMUST00000112495ENSMUST00000112501ENSMUST00000112502ENSMUST00000141544ENSMUST00000154693ENSMUSG00000075325ENSMUST00000146034ENSMUSG00000080547ENSMUST00000116897ENSMUSG00000083334ENSMUST00000118519
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136560 ENST00000259075 N/A 2.533±0.00 N/A N/A 3.847±0.00 N/A N/A N/A N/A 2.879±0.00 N/A 1.905±0.20 1.008±0.00 N/A
ENST00000392749 12.796±0.00 7.773±0.00 N/A 4.214±1.61 5.114±0.47 4.246±1.80 3.411±1.80 6.105±2.81 5.675±1.71 9.376±6.33 3.143±2.65 4.815±1.18 2.916±0.72 4.531±1.45
ENST00000402568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000403609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405852 N/A 4.766±0.00 1.186±0.00 N/A N/A 2.232±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.992±0.00 4.106±0.00
ENST00000429217 N/A N/A 2.911±0.00 3.142±0.00 N/A N/A N/A 6.210±0.00 4.010±0.00 N/A N/A N/A N/A N/A
ENST00000432002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439442 N/A N/A N/A N/A N/A N/A 5.216±0.00 N/A N/A 15.179±0.00 8.964±0.00 12.670±2.26 5.484±2.19 10.715±0.00
ENST00000440506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.196±0.00 8.343±0.00 13.871±0.00
ENST00000441987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461338 N/A N/A 2.155±0.00 N/A N/A N/A N/A N/A N/A N/A 2.913±0.00 6.533±0.00 N/A N/A
ENST00000463502 N/A N/A N/A N/A N/A N/A N/A N/A 9.853±0.00 N/A N/A 10.442±0.00 N/A N/A
ENST00000468831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000153250 ENST00000348849 8.518±0.00 3.834±0.00 N/A 0.414±0.00 4.629±0.00 2.616±0.00 2.669±1.56 2.379±0.00 2.093±0.00 10.760±0.00 1.252±1.11 3.120±0.49 10.185±0.00 3.124±0.00
ENST00000392753 N/A 4.060±0.00 1.068±0.00 0.645±0.00 3.355±0.00 N/A 1.902±1.18 2.992±0.00 2.170±1.55 5.815±0.00 1.442±0.00 4.620±0.55 16.665±10.30 3.238±0.00
ENST00000409075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409289 N/A N/A N/A N/A N/A N/A 2.536±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000409972 N/A N/A 1.870±0.00 1.297±0.00 3.949±0.00 N/A N/A N/A 5.280±0.00 N/A 0.879±0.00 6.485±0.41 43.338±0.00 4.929±0.00
ENST00000428519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474147 N/A N/A N/A N/A N/A N/A 1.364±0.00 1.155±0.00 N/A 3.763±0.00 N/A N/A N/A N/A
ENST00000474820 N/A N/A N/A N/A N/A 1.899±0.00 N/A 2.220±0.00 N/A N/A N/A N/A N/A N/A
ENST00000475103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490637 N/A N/A N/A N/A N/A N/A 0.973±0.00 N/A N/A 4.140±0.00 0.220±0.00 N/A N/A N/A
ENST00000491781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224467 ENST00000425470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.916±0.62
ENSG00000232337 ENST00000417893 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.011±0.00 N/A N/A N/A 0.009±0.00
ENSG00000244372 ENST00000486202 N/A N/A N/A N/A N/A 0.209±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279844 ENST00000623826 N/A N/A N/A N/A 0.012±0.00 N/A N/A N/A N/A N/A N/A 0.066±0.00 0.030±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026970 ENSMUST00000028347 12.009±2.89 6.783±0.90 12.030±0.37 5.945±3.90 9.187±0.83 4.743±0.66 7.700±1.09 7.639±1.68 4.536±0.67 20.475±1.76 1.785±0.62 8.560±3.75 18.294±1.96 8.118±0.00
ENSMUST00000112509 17.714±2.76 12.799±0.00 N/A 5.354±0.00 14.205±4.97 9.846±3.83 6.399±1.36 5.164±1.47 3.571±0.51 30.313±11.20 2.425±0.00 20.232±11.15 10.945±0.00 N/A
ENSMUST00000123046 28.786±1.83 21.759±0.00 N/A N/A 46.385±6.83 15.614±3.36 12.396±3.55 15.367±3.46 14.471±3.14 56.587±5.50 N/A 39.050±5.65 N/A 53.278±15.05
ENSMUST00000125485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153555 N/A N/A N/A N/A 18.248±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 24.292±8.84
ENSMUST00000164147 N/A 14.316±1.00 N/A 2.167±0.00 11.657±3.27 3.392±0.00 1.992±0.00 4.209±0.58 2.276±0.13 15.344±1.66 N/A 16.313±6.86 9.113±1.21 3.654±2.51
ENSMUSG00000064289 ENSMUST00000078074 N/A N/A N/A N/A 3.555±2.38 0.927±0.00 N/A 0.833±0.00 N/A 1.229±0.00 0.992±0.00 2.008±1.22 1.932±0.00 0.876±0.00
ENSMUST00000112494 2.073±0.49 0.905±0.18 3.572±0.75 2.292±0.50 2.140±0.57 0.790±0.16 0.794±0.28 0.734±0.21 2.311±1.46 1.532±0.26 0.402±0.00 1.433±0.92 1.104±0.23 0.888±0.18
ENSMUST00000112495 8.189±2.29 3.211±1.77 10.148±2.16 6.336±1.46 3.641±1.08 3.354±0.85 3.495±0.79 2.844±0.21 5.604±2.90 3.624±0.47 4.211±0.33 4.045±2.46 4.880±1.22 2.215±1.11
ENSMUST00000112501 N/A N/A N/A N/A N/A N/A N/A N/A 2.675±0.91 N/A 0.825±0.09 N/A 1.133±0.29 0.737±0.13
ENSMUST00000112502 N/A N/A N/A N/A 2.468±0.00 N/A N/A 1.055±0.11 0.626±0.00 N/A 1.373±0.00 1.018±0.00 N/A N/A
ENSMUST00000136688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.980±0.00
ENSMUST00000143515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.819±0.00 N/A N/A
ENSMUSG00000075325 ENSMUST00000146034 0.021±0.01 N/A 0.087±0.00 0.012±0.00 0.016±0.00 0.086±0.00 0.022±0.00 0.028±0.02 0.013±0.01 0.096±0.01 0.019±0.00 0.063±0.04 0.059±0.05 0.008±0.00
ENSMUSG00000080547 ENSMUST00000116897 26694.000±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083334 ENSMUST00000118519 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.188±0.00 N/A N/A 0.026±0.00 N/A

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