C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000123339  |
Ddx5-004 |
ENSMUSG00000020719 |
10090 | - |
11:106786071-106788883  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00012I | CIL_00012I_0002 | CGP | 11:106768253-106789185 |
| CIL_00012F | CIL_00012F_0002 | CGP | 11:106780355-106819930 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001701 | IMP | in utero embryonic development |
| GO:0003712 | IDA | transcription cofactor activity |
| GO:0005515 | IPI | protein binding |
| GO:0005524 | IEA | ATP binding |
| GO:0005634 | IC | nucleus |
| GO:0007623 | IMP | circadian rhythm |
| GO:0030529 | ISO | ribonucleoprotein complex |
| GO:0045893 | IDA | positive regulation of transcription, DNA-templated |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000225792
|
DDX5-001 | protein_coding | Homo_sapiens | 0 | 763 |
|
ENST00000450599
|
DDX5-006 | protein_coding | Homo_sapiens | 0 | 442 |
|
ENST00000540698
|
DDX5-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 372 |
|
ENST00000577922
|
DDX5-010 | protein_coding | Homo_sapiens | 0 | 763 |
|
ENST00000578190
|
DDX5-027 | protein_coding | Homo_sapiens | 0 | 577 |
|
ENST00000578400
|
DDX5-028 | nonsense_mediated_decay | Homo_sapiens | 0 | 440 |
|
ENST00000578804
|
DDX5-005 | protein_coding | Homo_sapiens | 0 | 640 |
|
ENST00000579091
|
DDX5-014 | protein_coding | Homo_sapiens | 0 | 516 |
|
ENST00000581230
|
DDX5-002 | retained_intron | Homo_sapiens | 0 | 763 |
|
ENST00000581693
|
DDX5-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 398 |
|
ENST00000581697
|
DDX5-012 | protein_coding | Homo_sapiens | 0 | 640 |
|
ENST00000581806
|
DDX5-009 | protein_coding | Homo_sapiens | 0 | 595 |
|
ENST00000583212
|
DDX5-015 | protein_coding | Homo_sapiens | 0 | 409 |
|
ENST00000583239
|
DDX5-013 | protein_coding | Homo_sapiens | 0 | 542 |
|
ENST00000583562
|
DDX5-016 | retained_intron | Homo_sapiens | 0 | 274 |
|
ENST00000584279
|
DDX5-011 | protein_coding | Homo_sapiens | 0 | 560 |
|
ENST00000585060
|
DDX5-026 | protein_coding | Homo_sapiens | 0 | 444 |
|
ENST00000585111
|
DDX5-008 | protein_coding | Homo_sapiens | 0 | 244 |
|
ENST00000585223
|
DDX5-025 | retained_intron | Homo_sapiens | 0 | 366 |
