C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: DEAD (Asp-Glu-Ala-Asp) box helicase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000581697 DDX5-012 ENSG00000108654 9606 - 17:64503568-64506626 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012I CIL_00012I_0001 CGP 17:64477785-64508199
CIL_00012F CIL_00012F_0001 CGP 17:64499616-64542461

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005524 IEA ATP binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000129585 Ddx5-003 protein_coding Mus_musculus 0 651
ENSMUST00000133426 Ddx5-002 nonsense_mediated_decay Mus_musculus 0 651
ENSMUST00000021062 Ddx5-001 protein_coding Mus_musculus 0 651
ENSMUST00000120566 Gm12183-001 processed_pseudogene Mus_musculus 0 640
ENSMUST00000123339 Ddx5-004 protein_coding Mus_musculus 0 640
ENSMUST00000106779 Ddx5-008 processed_transcript Mus_musculus 0 320
ENSMUST00000127481 Ddx5-007 nonsense_mediated_decay Mus_musculus 0 243

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