C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008S6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm389 VISTA 9606 7:77922679-78523685
GeneTranscriptPositionBiotype
ENSG00000187391 (MAGI2)
membrane associated guanylate kinase, WW and PDZ domain containing 2 		ENST00000354212 (MAGI2-001) 78017076-79453574 protein_coding
ENST00000419488 (MAGI2-002) 78017076-79453555 protein_coding
ENST00000517762 (MAGI2-008) 78518522-78521647 processed_transcript
ENST00000519748 (MAGI2-004) 78078383-78490020 retained_intron
ENST00000520379 (MAGI2-005) 78185505-78490001 retained_intron
ENST00000522342 (MAGI2-009) 78158207-78178067 processed_transcript
ENST00000522391 (MAGI2-003) 78019539-79453470 protein_coding
ENST00000524268 (MAGI2-007) 78159799-78167973 retained_intron
ENST00000524316 (MAGI2-006) 78178036-78197856 processed_transcript
ENST00000535697 (MAGI2-201) 78017057-78627242 protein_coding
ENSG00000226230 (AC007237.2)
 ENST00000442074 (AC007237.2-001) 78486530-78487028 processed_pseudogene
ENSG00000231322 (RPL13AP17)
ribosomal protein L13a pseudogene 17 		ENST00000414782 (RPL13AP17-004) 78347214-78350556 retained_intron
ENST00000421208 (RPL13AP17-001) 78358292-78358872 transcribed_processed_pseudogene
ENST00000428436 (RPL13AP17-003) 78347236-78350529 retained_intron
ENST00000450028 (RPL13AP17-002) 78347142-78359458 processed_transcript
ENSG00000232756 (RP5-1185I7.1)
 ENST00000431722 (RP5-1185I7.1-002) 77990384-77994942 antisense
ENST00000438324 (RP5-1185I7.1-003) 77990420-77995171 antisense
ENST00000454234 (RP5-1185I7.1-001) 77990417-77992623 antisense
CIL_0008S6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm389 VISTA 10090 5:20193774-20794889
GeneTranscriptPositionBiotype
ENSMUSG00000039987 (Phtf2)
putative homeodomain transcription factor 2 		ENSMUST00000118174 (Phtf2-001) 20758663-20882124 protein_coding
ENSMUST00000124431 (Phtf2-007) 20782388-20805707 nonsense_mediated_decay
ENSMUST00000133784 (Phtf2-005) 20782385-20855191 processed_transcript
ENSMUST00000139325 (Phtf2-003) 20788747-20882077 retained_intron
ENSMUST00000140147 (Phtf2-002) 20793302-20882078 retained_intron
ENSMUST00000153194 (Phtf2-004) 20759663-20774113 nonsense_mediated_decay
ENSMUST00000156044 (Phtf2-006) 20805684-20882045 nonsense_mediated_decay
ENSMUSG00000040003 (Magi2)
membrane associated guanylate kinase, WW and PDZ domain containing 2 		ENSMUST00000088516 (Magi2-003) 19227046-20702903 protein_coding
ENSMUST00000101558 (Magi2-001) 19907518-20704798 protein_coding
ENSMUST00000115267 (Magi2-002) 19907861-20702938 protein_coding
ENSMUSG00000067798 (Magi2)
 ENSMUST00000088514 (Magi2-201) 20539890-20540404 protein_coding
ENSMUSG00000087768 (Gm22755)
predicted gene, 22755 		ENSMUST00000157143 (Gm22755-201) 20264341-20264440 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008S6_0001ENSG00000187391ENST00000354212ENST00000419488ENST00000517762ENST00000519748ENST00000520379ENST00000522342ENST00000522391ENST00000524268ENST00000524316ENST00000535697ENSG00000226230ENST00000442074ENSG00000231322ENST00000414782ENST00000421208ENST00000428436ENST00000450028ENSG00000232756ENST00000431722ENST00000438324ENST00000454234CIL_0008S6_0002ENSMUSG00000039987ENSMUST00000118174ENSMUST00000124431ENSMUST00000133784ENSMUST00000139325ENSMUST00000140147ENSMUST00000153194ENSMUST00000156044ENSMUSG00000040003ENSMUST00000088516ENSMUST00000101558ENSMUST00000115267ENSMUSG00000067798ENSMUST00000088514ENSMUSG00000087768ENSMUST00000157143
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008S6_0001ENSG00000187391ENST00000354212ENST00000419488ENST00000520379ENST00000522391ENST00000535697ENSG00000226230ENST00000442074ENSG00000231322ENST00000414782ENST00000421208ENST00000428436ENST00000450028ENSG00000232756ENST00000431722ENST00000438324ENST00000454234CIL_0008S6_0002ENSMUSG00000039987ENSMUST00000118174ENSMUST00000124431ENSMUST00000133784ENSMUST00000139325ENSMUST00000140147ENSMUST00000153194ENSMUSG00000040003ENSMUST00000088516ENSMUST00000101558ENSMUST00000115267ENSMUSG00000067798ENSMUST00000088514ENSMUSG00000087768ENSMUST00000157143
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000187391 ENST00000354212 N/A N/A 1.229±0.00 N/A 0.710±0.00 0.800±0.21 N/A N/A 1.329±0.00 N/A N/A N/A N/A N/A
ENST00000419488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.209±0.00 0.995±0.00
ENST00000517762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.119±0.00 N/A N/A N/A
ENST00000522342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522391 N/A N/A N/A 2.918±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535697 N/A N/A N/A 5.672±0.00 1.498±0.00 1.104±0.00 N/A N/A N/A 1.411±0.00 0.677±0.00 0.597±0.00 0.211±0.00 1.540±0.00
ENSG00000226230 ENST00000442074 N/A N/A 0.259±0.00 0.629±0.50 N/A 0.187±0.00 0.446±0.00 N/A 0.601±0.00 N/A N/A N/A N/A N/A
ENSG00000231322 ENST00000414782 N/A N/A N/A 0.088±0.00 N/A 0.384±0.00 0.088±0.00 N/A N/A N/A N/A 0.327±0.00 N/A N/A
ENST00000421208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.114±0.00
ENST00000428436 N/A N/A N/A 0.458±0.00 N/A N/A N/A N/A 0.554±0.00 N/A N/A N/A N/A N/A
ENST00000450028 N/A N/A 0.223±0.00 0.022±0.00 0.082±0.00 0.033±0.00 N/A N/A 0.094±0.00 0.218±0.11 N/A 0.143±0.00 N/A 0.014±0.00
ENSG00000232756 ENST00000431722 N/A N/A N/A N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000438324 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.594±0.00 N/A N/A N/A 0.050±0.00
ENST00000454234 0.021±0.00 0.126±0.00 N/A 0.106±0.00 0.014±0.00 0.045±0.00 0.020±0.00 0.049±0.00 0.049±0.00 0.446±0.40 N/A 0.026±0.01 N/A 0.019±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039987 ENSMUST00000118174 2.446±0.19 0.360±0.16 3.172±0.17 4.714±1.62 2.462±1.63 0.428±0.16 4.919±1.86 1.269±0.25 1.471±0.93 0.967±0.61 3.504±0.00 1.383±0.86 1.954±0.79 1.374±0.34
ENSMUST00000124431 N/A N/A N/A 6.486±0.00 N/A 1.065±0.00 N/A N/A N/A N/A N/A 10.202±0.00 10.795±3.74 5.416±0.00
ENSMUST00000133784 N/A 0.449±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139325 N/A 0.179±0.02 N/A N/A N/A 0.157±0.00 N/A N/A N/A 0.566±0.00 N/A 0.736±0.07 N/A N/A
ENSMUST00000140147 N/A 0.234±0.08 N/A N/A N/A 0.233±0.00 N/A 0.739±0.17 0.439±0.22 0.433±0.00 N/A 0.370±0.01 N/A 0.456±0.00
ENSMUST00000153194 N/A 0.565±0.12 N/A N/A 1.339±0.06 0.471±0.21 N/A 0.472±0.00 0.457±0.00 0.652±0.08 N/A 0.876±0.20 N/A 0.497±0.00
ENSMUST00000156044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000040003 ENSMUST00000088516 N/A N/A N/A N/A 0.154±0.00 0.124±0.00 N/A 0.345±0.00 0.012±0.00 N/A N/A 0.188±0.00 N/A 0.981±0.05
ENSMUST00000101558 0.551±0.02 0.249±0.09 N/A 10.884±3.66 0.599±0.33 0.185±0.07 0.239±0.18 1.164±0.17 0.062±0.04 0.243±0.00 0.118±0.00 0.578±0.33 0.150±0.08 0.390±0.00
ENSMUST00000115267 N/A 0.126±0.00 N/A 7.651±0.00 0.084±0.00 0.167±0.03 N/A N/A 0.012±0.00 N/A 0.058±0.02 0.306±0.14 N/A N/A
ENSMUSG00000067798 ENSMUST00000088514 N/A N/A N/A 0.298±0.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087768 ENSMUST00000157143 N/A N/A N/A 26.385±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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