C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000I1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182087-ENSG00000064666 CGP 9606 19:1009648-1039068
GeneTranscriptPositionBiotype
ENSG00000064666 (CNN2)
calponin 2 		ENST00000263097 (CNN2-001) 1026581-1039068 protein_coding
ENST00000348419 (CNN2-003) 1026610-1039068 protein_coding
ENST00000562015 (CNN2-007) 1026586-1032695 protein_coding
ENST00000562075 (CNN2-006) 1026691-1036677 protein_coding
ENST00000562958 (CNN2-005) 1026629-1039068 protein_coding
ENST00000564572 (CNN2-011) 1036799-1039064 retained_intron
ENST00000565096 (CNN2-004) 1026618-1039068 protein_coding
ENST00000566695 (CNN2-008) 1030943-1037733 protein_coding
ENST00000568865 (CNN2-009) 1031137-1038309 protein_coding
ENST00000569352 (CNN2-013) 1026629-1037632 nonsense_mediated_decay
ENST00000606983 (CNN2-014) 1026662-1036472 protein_coding
ENST00000607102 (CNN2-010) 1026691-1036688 protein_coding
ENSG00000182087 (TMEM259)
transmembrane protein 259 		ENST00000333175 (TMEM259-002) 1009651-1021115 protein_coding
ENST00000356663 (TMEM259-001) 1009648-1021179 protein_coding
ENST00000586250 (TMEM259-007) 1012113-1014304 protein_coding
ENST00000586285 (TMEM259-014) 1010695-1011992 protein_coding
ENST00000586704 (TMEM259-009) 1009653-1020851 retained_intron
ENST00000589055 (TMEM259-013) 1011866-1014247 retained_intron
ENST00000589831 (TMEM259-010) 1012541-1013639 retained_intron
ENST00000592052 (TMEM259-011) 1009720-1011356 retained_intron
ENST00000592590 (TMEM259-008) 1009650-1017420 protein_coding
ENST00000592618 (TMEM259-012) 1009652-1012289 retained_intron
ENST00000593068 (TMEM259-003) 1009648-1013242 nonsense_mediated_decay
ENST00000607316 (TMEM259-005) 1011852-1013342 retained_intron
ENSG00000274177 (LLNLR-284B4.1)
 ENST00000610701 (LLNLR-284B4.1-001) 1010221-1010907 antisense
ENSG00000279753 (AC011558.5)
 ENST00000623459 (AC011558.5-001) 1038727-1039064 TEC
CIL_0000I1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000013858-ENSMUSG00000004665 CGP 10090 10:79974948-79996062
GeneTranscriptPositionBiotype
ENSMUSG00000004665 (Cnn2)
calponin 2 		ENSMUST00000004784 (Cnn2-001) 79988584-79996062 protein_coding
ENSMUST00000105374 (Cnn2-002) 79988623-79994684 protein_coding
ENSMUSG00000013858 (Tmem259)
transmembrane protein 259 		ENSMUST00000052885 (Tmem259-001) 79977118-79984330 protein_coding
ENSMUST00000124536 (Tmem259-002) 79977358-79984040 protein_coding
ENSMUST00000124889 (Tmem259-005) 79977963-79978776 retained_intron
ENSMUST00000126383 (Tmem259-003) 79975890-79978940 retained_intron
ENSMUST00000132080 (Tmem259-004) 79974948-79978773 retained_intron
ENSMUSG00000095615 (Gm26243)
predicted gene, 26243 		ENSMUST00000179260 (Gm26243-201) 79985506-79985612 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000I1_0001ENSG00000064666ENST00000263097ENST00000348419ENST00000562015ENST00000562075ENST00000562958ENST00000564572ENST00000565096ENST00000566695ENST00000568865ENST00000569352ENST00000606983ENST00000607102ENSG00000182087ENST00000333175ENST00000356663ENST00000586250ENST00000586285ENST00000586704ENST00000589055ENST00000589831ENST00000592052ENST00000592590ENST00000592618ENST00000593068ENST00000607316ENSG00000274177ENST00000610701ENSG00000279753ENST00000623459CIL_0000I1_0002ENSMUSG00000004665ENSMUST00000004784ENSMUST00000105374ENSMUSG00000013858ENSMUST00000052885ENSMUST00000124536ENSMUST00000124889ENSMUST00000126383ENSMUST00000132080ENSMUSG00000095615ENSMUST00000179260
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000I1_0001ENSG00000064666ENST00000263097ENST00000348419ENST00000562958ENST00000565096ENST00000566695ENST00000568865ENSG00000182087ENST00000333175ENST00000356663ENST00000586285ENST00000586704ENST00000592052ENST00000592590ENST00000593068ENSG00000274177ENST00000610701ENSG00000279753ENST00000623459CIL_0000I1_0002ENSMUSG00000004665ENSMUST00000004784ENSMUST00000105374ENSMUSG00000013858ENSMUST00000052885ENSMUST00000124536ENSMUSG00000095615ENSMUST00000179260
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000064666 ENST00000263097 24.677±0.00 16.439±0.00 N/A 4.992±0.00 23.945±20.48 1.258±0.00 8.183±5.50 9.970±9.14 9.411±0.00 82.052±78.24 5.780±0.00 73.516±48.78 19.272±7.00 4.222±0.28
ENST00000348419 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.490±0.00 N/A 32.748±0.00 N/A N/A
ENST00000562015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562958 N/A N/A N/A N/A N/A 2.970±0.00 N/A N/A 3.012±0.00 N/A N/A N/A N/A N/A
ENST00000564572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565096 N/A N/A N/A 0.565±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566695 N/A N/A N/A N/A N/A 17.819±0.00 N/A N/A N/A N/A N/A 37.374±0.00 29.674±0.00 7.123±4.40
ENST00000568865 N/A N/A 32.851±0.00 2.622±0.00 10.358±0.00 6.379±0.00 3.464±1.02 4.497±0.00 13.614±0.00 21.551±0.00 1.112±0.00 24.135±0.00 N/A 1.305±0.00
ENST00000569352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000182087 ENST00000333175 N/A N/A 1.778±0.00 12.283±0.00 N/A 11.039±0.00 6.030±0.00 N/A 0.880±0.00 10.093±6.76 4.477±0.00 21.255±0.00 34.200±0.00 46.045±0.00
ENST00000356663 23.260±0.00 24.300±0.00 2.724±0.00 10.535±5.41 13.050±9.71 8.382±4.43 9.026±6.66 33.338±19.79 16.155±12.75 29.931±0.00 12.124±8.70 28.911±22.97 38.436±19.54 27.215±5.76
ENST00000586250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 51.907±0.00 N/A N/A
ENST00000586704 N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.664±0.00 N/A N/A N/A N/A
ENST00000589055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592052 N/A N/A N/A N/A 18.670±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.398±0.00 19.015±0.00
ENST00000592618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593068 18.389±0.00 23.556±0.00 N/A N/A 14.910±0.00 10.767±0.00 N/A N/A N/A N/A N/A N/A N/A 24.834±0.00
ENST00000607316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000274177 ENST00000610701 N/A N/A N/A N/A 67.107±0.00 N/A 34.575±0.00 N/A 65.986±0.00 77.858±0.00 35.225±0.00 N/A 128.371±11.59 N/A
ENSG00000279753 ENST00000623459 N/A N/A N/A 6.776±0.00 183.152±0.00 9.022±0.00 19.855±0.00 4.709±0.00 19.553±0.00 246.804±0.00 N/A 357.574±61.42 N/A 43.961±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004665 ENSMUST00000004784 50.029±31.97 16.653±4.89 71.865±6.79 5.942±3.65 75.457±29.49 33.248±7.85 19.041±2.89 19.686±1.70 9.195±6.63 180.593±21.55 1.919±0.36 82.102±33.98 72.014±16.54 2.287±1.16
ENSMUST00000105374 9.087±0.00 13.395±2.66 N/A 2.485±0.26 43.257±13.73 14.203±3.06 N/A 7.248±0.00 N/A N/A 1.103±0.15 52.145±9.48 99.113±27.99 N/A
ENSMUSG00000013858 ENSMUST00000052885 56.061±13.91 108.850±27.56 40.559±3.16 50.343±26.73 63.612±24.00 76.529±3.65 55.531±10.33 74.005±10.16 36.093±5.68 58.461±8.86 25.717±6.79 66.564±30.76 32.789±14.15 55.112±25.11
ENSMUST00000124536 23.673±2.98 89.678±22.26 26.228±1.92 30.755±22.43 48.720±28.13 69.027±12.24 19.052±1.69 32.413±6.06 35.422±11.03 39.672±11.37 8.305±0.66 50.056±16.35 24.921±13.85 20.527±9.26
ENSMUST00000124889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000095615 ENSMUST00000179260 N/A N/A 15.181±0.00 13.137±0.00 N/A N/A N/A N/A 15.516±0.00 N/A N/A N/A N/A N/A

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