C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sperm specific antigen 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000480753 SSFA2-003 ENSG00000138434 9606 + 2:181891833-181894695 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartLiverLungMuscleOvaryENST00000480753
Transcript ID Bladder Brain Colon Heart Liver Lung Muscle Ovary
ENST00000480753 4.695±0.00 6.053±0.00 10.656±0.00 2.883±0.00 4.382±0.00 13.696±0.00 1.515±0.00 41.273±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080Y CIL_00080Y_0001 VISTA 2:181386314-181987082
CIL_0004BY CIL_0004BY_0002 CGP 2:181673088-181930738
CIL_0004BV CIL_0004BV_0002 CGP 2:181891833-182131398

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111785 Ssfa2-001 protein_coding Mus_musculus 0 499
ENSMUST00000111788 Ssfa2-003 protein_coding Mus_musculus 0 455
ENSMUST00000111784 Ssfa2-004 protein_coding Mus_musculus 0 412
ENSMUST00000124938 Ssfa2-005 processed_transcript Mus_musculus 0 407

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