C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: paxillin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125054 Pxn-003 ENSMUSG00000029528 10090 + 5:115544796-115549756 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastENSMUST00000125054
Transcript ID Brain Breast
ENSMUST00000125054 0.824±0.00 2.074±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZA CIL_0007ZA_0002 VISTA 5:114966986-115567561
CIL_0009CQ CIL_0009CQ_0002 VISTA 5:115188390-115791906

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228307 PXN-001 protein_coding Homo_sapiens 0 651
ENST00000267257 PXN-201 protein_coding Homo_sapiens 0 654
ENST00000323871 PXN-005 retained_intron Homo_sapiens 0 651
ENST00000424649 PXN-002 protein_coding Homo_sapiens 0 651
ENST00000458477 PXN-003 protein_coding Homo_sapiens 0 651
ENST00000536957 PXN-004 protein_coding Homo_sapiens 0 651
ENST00000538144 PXN-006 processed_transcript Homo_sapiens 0 654
ENST00000543331 PXN-009 protein_coding Homo_sapiens 0 267
ENST00000546532 PXN-013 protein_coding Homo_sapiens 0 252
ENST00000547983 PXN-017 nonsense_mediated_decay Homo_sapiens 0 630
ENST00000548912 PXN-012 protein_coding Homo_sapiens 0 252
ENST00000551327 PXN-021 processed_transcript Homo_sapiens 0 303
ENST00000552550 PXN-014 protein_coding Homo_sapiens 0 243

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