C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 40
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126652 Ccdc40-003 ENSMUSG00000039963 10090 + 11:119258927-119265236 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000126652
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000126652 0.016±0.00 0.111±0.06 0.163±0.06 1.898±0.12 0.094±0.06 0.206±0.09 0.096±0.06 0.050±0.04 0.168±0.15 1.551±0.43 0.035±0.02 3.490±1.09 0.514±0.25 16.711±4.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000040 CIL_000040_0002 CGP 11:119143045-119265236
CIL_00003V CIL_00003V_0002 CGP 11:119228572-119285454

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000397545 CCDC40-001 protein_coding Homo_sapiens 0 263
ENST00000572253 CCDC40-005 retained_intron Homo_sapiens 0 198
ENST00000574799 CCDC40-004 retained_intron Homo_sapiens 0 263
ENST00000575431 CCDC40-013 retained_intron Homo_sapiens 1e-19 100

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