C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | scavenger receptor class B, member 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000127148  |
Scarb1-005 |
ENSMUSG00000037936 |
10090 | - |
5:125277566-125294109  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000399 | CIL_000399_0002 | CGP | 5:125017153-125341094 |
| CIL_00006N | CIL_00006N_0003 | CGP | 5:125277087-125390202 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001935 | IMP | endothelial cell proliferation |
| GO:0005887 | IDA | integral component of plasma membrane |
| GO:0005901 | IDA | caveola |
| GO:0006707 | IMP | cholesterol catabolic process |
| GO:0007155 | IEA | cell adhesion |
| GO:0008035 | IDA | high-density lipoprotein particle binding |
| GO:0016021 | IDA | integral component of membrane |
| GO:0030301 | IMP | cholesterol transport |
| GO:0043534 | IMP | blood vessel endothelial cell migration |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000261693
|
SCARB1-004 | protein_coding | Homo_sapiens | 0 | 320 |
|
ENST00000339570
|
SCARB1-001 | protein_coding | Homo_sapiens | 0 | 399 |
|
ENST00000415380
|
SCARB1-006 | protein_coding | Homo_sapiens | 0 | 320 |
|
ENST00000535005
|
SCARB1-003 | processed_transcript | Homo_sapiens | 0 | 320 |
|
ENST00000538291
|
SCARB1-005 | retained_intron | Homo_sapiens | 0 | 320 |
|
ENST00000544327
|
SCARB1-009 | protein_coding | Homo_sapiens | 0 | 320 |
|
ENST00000546215
|
SCARB1-007 | protein_coding | Homo_sapiens | 0 | 320 |
