C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: scavenger receptor class B, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000538291 SCARB1-005 ENSG00000073060 9606 - 12:124778278-124863863 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000538291
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000538291 1.082±0.00 0.135±0.00 0.708±0.47 2.063±1.29 0.195±0.00 0.979±0.00 0.473±0.00 0.832±0.00 1.000±0.00 0.296±0.10 2.382±1.48 2.542±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000399 CIL_000399_0001 CGP 12:124324415-124882668
CIL_00006N CIL_00006N_0002 CGP 12:124776856-124917368

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000148373 Scarb1-003 retained_intron Mus_musculus 0 1033
ENSMUST00000111390 Scarb1-002 protein_coding Mus_musculus 0 1031
ENSMUST00000086075 Scarb1-001 protein_coding Mus_musculus 0 1031
ENSMUST00000127148 Scarb1-005 protein_coding Mus_musculus 0 320
ENSMUST00000099060 Gcnt7-001 protein_coding Mus_musculus 0.0004 53
ENSDART00000126141 CABZ01092745.1-201 protein_coding Danio_rerio 0.0004 53

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