C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RAB17, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128226 Rab17-005 ENSMUSG00000026304 10090 - 1:90958731-90969548 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonOvaryENSMUST00000128226
Transcript ID Adrenal Colon Ovary
ENSMUST00000128226 0.118±0.00 0.846±0.00 0.627±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008L9 CIL_0008L9_0002 VISTA 1:90453497-91055787
CIL_0007RW CIL_0007RW_0002 VISTA 1:90676298-91284359
CIL_0008D3 CIL_0008D3_0002 VISTA 1:90908179-91512308
CIL_0000XK CIL_0000XK_0002 CGP 1:90953108-90969661
CIL_0002H4 CIL_0002H4_0002 CGP 1:90958133-91128944

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264601 RAB17-001 protein_coding Homo_sapiens 0 414
ENST00000409822 RAB17-011 protein_coding Homo_sapiens 0 425
ENST00000411462 RAB17-005 protein_coding Homo_sapiens 0 337
ENST00000414278 RAB17-003 nonsense_mediated_decay Homo_sapiens 0 416
ENST00000430445 RAB17-008 protein_coding Homo_sapiens 0 320
ENST00000477149 RAB17-004 retained_intron Homo_sapiens 0 200

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